Bordetella pseudohinzii: BBN53_18970
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Entry
BBN53_18970 CDS
T04945
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BBN53_18970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpdz03021
]
BBN53_18970
Transcription machinery [BR:
bpdz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBN53_18970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_23
HTH_11
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ANY17782
UniProt:
A0A0J6BYV5
LinkDB
All DBs
Position
complement(4104380..4104880)
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AA seq
166 aa
AA seq
DB search
MSAIKQPHPSLDALYRNHHGWLVAWLRRRLGCAHDAADLSHDAYERLMVSGRLPAEGQDR
AFLMQIARGLVIDLHRRRALERAYLDALAQLPENHMPSAEARAQALQTLVAIDAALDSLP
AKARETFILSRFEGLTYSRIAQRLGISVALVRKHMLRAAQVCLEWL
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcgatcaagcagccgcatccttctttggatgcgctgtatcggaaccatcatggt
tggctggttgcgtggctgcgccgccgcctgggctgcgcgcacgatgcggccgacctgtcg
catgatgcctatgagcgcttgatggtcagcggccgcctgccggccgaggggcaggacagg
gctttcttgatgcagatcgcgcgcggcctggtgatcgacctgcatcgccggcgcgcgctg
gagcgcgcctacctggatgcgctggcgcaattgcctgaaaaccatatgccctcggccgag
gcgcgggcccaggccctgcaaaccctggtcgccatcgatgccgcgctggacagcctgccg
gccaaggcgcgcgaaaccttcatcctctcgcgcttcgaggggctgacctattcccgcatc
gcgcagcggctggggatctccgtggcgctggtgcgcaagcacatgctgcgcgccgcccag
gtctgcctggagtggctgtga
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