KEGG   Bathycoccus prasinos: Bathy05g02250
Entry
Bathy05g02250     CDS       T03089                                 
Name
(RefSeq) hypothetical protein
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03022  Basal transcription factors
bpg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Bathy05g02250
  09124 Replication and repair
   03420 Nucleotide excision repair
    Bathy05g02250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpg03021]
    Bathy05g02250
   03400 DNA repair and recombination proteins [BR:bpg03400]
    Bathy05g02250
Transcription machinery [BR:bpg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Bathy05g02250
DNA repair and recombination proteins [BR:bpg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Bathy05g02250
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 IBR
Other DBs
NCBI-GeneID: 19015728
NCBI-ProteinID: XP_007513132
UniProt: K8EW38
LinkDB
Position
5:complement(401459..402817)
AA seq 452 aa
MSSLEEEERGNRIPFEPDDPRYEFTAEEEENALKAYEKRYQKERTWEDLTEDAEGNLRSS
SLEKDRSQRRRFLANEKRKKIEKEASQSRVAKGMIRYCYVILDLSDAIHVEDMRPNRSAV
LLPLMIKFVREFFNQNPLSQLGLIACKDGKAERITELSGSPETHVKAIKKAFASDGVGGS
FSLQNGLEQAMEGLRDVPPFGAREIIAIISSLSTCDPGNINDSVRKVKKMKARTNVICVA
AETRVFKKLSEETKGKFSVSLDQSHLTRLIMECAPPPALLLETAKPALVEMGFPRREPRK
FGLGAGDEDDRDVLTIGPRNGEYRCPRCEARAEELPSQCGTCQLSLVSSPHLARSYHHLF
PVMPFVEVKVDGDSKNEEEEEKKRKKNSGKDDDDDGQFLRECFGCCVVVDASTGMLSKCL
KCEKEFCFACDVYIHDRLHNCVGCLSTALDKE
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtcgtcgctcgaagaagaagaacggggaaaccgaatcccgttcgaaccggacgaccct
cggtacgaattcaccgccgaagaggaagaaaacgcgttgaaagcgtacgaaaaacggtac
caaaaagaacgcacgtgggaagatttaacggaagatgccgagggaaacttacgctcgtcc
tcgctggaaaaggaccgatctcagcgacggcggtttctggcgaacgaaaagaggaagaaa
atcgagaaagaagcgtcgcagtccagagttgccaaagggatgattcggtactgttacgtg
attctcgatttgagcgacgcaatacacgtggaagacatgcgaccgaatcgaagcgcagtc
ctattaccgctgatgattaaattcgttcgagagtttttcaatcaaaaccccttgtcgcag
ttaggtttgatcgcgtgtaaagatgggaaagcggaacggattaccgaactgtccggatct
ccggagacgcacgtgaaggcgattaagaaggcgtttgcgagcgacggcgtcggggggagt
ttttcgttacaaaacgggttagagcaagcgatggaaggattgagagacgtgccaccgttt
ggtgcgagggagattatagcgattatttcgagtttgagcacgtgcgatccggggaatatc
aacgattcggtgaggaaagtgaagaagatgaaagcgaggacgaacgttatttgcgtggcg
gcggagacgagggtgtttaaaaagttaagcgaggagacaaaagggaagtttagcgtgagt
ttggaccagtcgcatttgacgagattgattatggagtgcgcgcctccgccggcgttgttg
ttggaaaccgcgaaaccggcgttggtggagatgggatttccgagacgagagccgaggaag
tttggcctaggcgccggagacgaggacgatcgagacgtgttgactattggacctaggaac
ggagagtatcggtgtccgagatgtgaggcgagagcggaggagctaccgagtcagtgtggg
acgtgtcagttatcgttggtatcttcgccgcacttggcgagaagttaccaccatttgttc
ccggtgatgccgtttgtggaagtgaaagtagacggcgattcaaaaaacgaggaggaagag
gagaagaagagaaaaaaaaacagcggtaaagatgatgatgatgatggacaatttctcaga
gagtgctttggatgttgtgtcgtggtggatgcgtcgactgggatgttgagtaagtgtctc
aaatgcgagaaagaattttgcttcgcgtgcgatgtatacattcacgaccggttgcataac
tgcgtcggatgtttatcgacggctttagacaaagagtag

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