Paraburkholderia phymatum: Bphy_0980
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Entry
Bphy_0980 CDS
T00704
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bph
Paraburkholderia phymatum
Pathway
bph03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Bphy_0980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_0980
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Bphy_0980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF1045
DUF3284
Motif
Other DBs
NCBI-ProteinID:
ACC70169
UniProt:
B2JG87
LinkDB
All DBs
Position
1:1095703..1096677
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AA seq
324 aa
AA seq
DB search
MAHMIWKGAISFGLVHVPVQLYPATKSEKVGFNLLDKRSIDPIGYRQINKRTGKEVTREN
IVRGFEYEKDKYVVLTDEEIRAANPESTQTVDIIAFVEAPEIPFLYLDTPYYLTPDRKGE
KVYALLRDAMKATGKIGVANVVMHNKQHLAALIPVGPMLALNTLRWAEEVRPFDEFKLPD
ENARKSGVTARELDMAKKLIDDMSGKWDPADYKDTFRDDILALVDRKVQAGMTEEVMEVE
TPRETRASADILDLSDLLKRSLGRGAKGKPAARAAASDDSEEQDAAPAKRRAAAKKATRR
TTGTATRKSTSGGASRTARKRRAA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggctcacatgatctggaaaggcgcgatcagcttcggtctcgtccatgtgcccgtacaa
ctgtatccggccacgaagtcggagaaggtcggcttcaatctgctcgacaaacgctcaatc
gatcccatcggttatcggcagatcaacaagcgcacgggtaaggaagtgacgcgcgagaac
atcgtgcgcggtttcgagtatgagaaggacaaatacgtcgtgctgacggacgaagagatt
cgcgcggcgaacccggagtcgacgcagacggtcgacatcattgcgttcgtcgaagcgccc
gagataccgtttctctatctcgacacgccgtactacctgacgcctgaccgcaagggcgag
aaggtctatgcgttgctgcgcgacgcgatgaaggcgacgggcaagatcggcgtcgcgaat
gtcgtgatgcacaacaagcagcatctggccgcgctgattcccgtcgggccgatgctcgcg
ctgaacacgctgcgctgggccgaggaggtgcgtccgttcgacgagttcaagctgcccgac
gaaaatgccaggaagtcgggcgtgacggcgcgcgaactggacatggcgaaaaagctgatc
gacgacatgagcggcaagtgggatcccgccgactacaaggacacgttccgcgacgacatc
ctcgcgctcgtcgacaggaaggtgcaggcgggcatgacggaagaggtgatggaggtcgaa
acgccgcgagaaacgcgggcttcggcggatattctcgacttgtccgatctgctcaagcgt
agcctcggccgcggcgcaaaaggcaagcccgcagcgcgcgctgcagcgagcgacgacagt
gaggagcaggacgccgcgcccgcgaaacgtcgcgcggcagcgaagaaagccacgcgacgc
acgaccgggacggccacgcgcaagagcacgtccggcggcgcctcccgtacggctcgcaag
cggcgcgcggcctga
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