Paraburkholderia phymatum: Bphy_3941
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Entry
Bphy_3941 CDS
T00704
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bph
Paraburkholderia phymatum
Pathway
bph02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bphy_3941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bph03021
]
Bphy_3941
Transcription machinery [BR:
bph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bphy_3941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GerE
UTP20_C
Motif
Other DBs
NCBI-ProteinID:
ACC73064
UniProt:
B2JP61
LinkDB
All DBs
Position
2:complement(911227..913284)
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AA seq
685 aa
AA seq
DB search
MANSMTKKLNEVSVDDDASQSEETAATPAPGKGEKAKARDRRAKEKALLKDAFASSQPGT
VEELEERRSKLRALIKLGKERGFLTYGEINDHLPDNFTETEAIEGIISTFNDMGVAVYEQ
APDAETLLLNDNAPNASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTRE
GEIEIAKRIEDGLKHMVMAISACPTTIADILAMAERVANEEIRIDELVDGLIDVNAEDTD
GFSEQEAEAIESEDEEEEEADEEEEEDDDGAAQATANAAQLEELKRLSLEKFALISEWFD
KMRRAFEKEGYKSKSYLKAQETIQEELMMIRFTARTVERLCDTLRAQVDEVRQVERQILH
TVVDKCGMPRAEFIARFPGNETDLEWADKIVSENHAYSAILSRNVPAIREQQQRLLDLQA
RVVLPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGN
IGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQ
ILQETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTV
APSDAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQ
IEAKALRKLRHPSRSDKLKSFLEGN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactccatgacgaaaaagctgaacgaagtatccgtcgatgacgacgcatcccag
agcgaagaaactgcagcgacccccgctccgggcaaaggcgagaaggccaaggcacgcgac
cgccgcgctaaagaaaaggcgctgctgaaggacgcgttcgcgtcttcgcagcctggcacc
gtcgaggagcttgaagagcgccgctcgaagctgcgggcgctgatcaagctcggcaaggag
cgcggcttcctgacctacggcgagatcaacgaccacctcccggacaacttcacggaaacc
gaggcgatcgaagggatcatcagcacgttcaacgacatgggtgttgccgtctacgagcag
gcgcccgatgccgaaacgctgctgttgaacgacaacgcgccgaacgcctcgtcggacgac
gaagtggaagaggaagccgaagtcgcgctgtccactgtcgattccgaatttggtcgcacg
accgacccggtgcgtatgtacatgcgcgaaatgggcacggtcgaactgctcacgcgtgaa
ggcgaaatcgaaatcgcgaagcgtatcgaagacgggctgaagcacatggtgatggccatc
tccgcgtgcccgacgacgatcgccgacatcctcgcgatggcggagcgcgttgcgaacgaa
gagattcgcatcgacgaactcgtcgacggcctgatcgacgtgaacgcagaagataccgat
ggcttctccgaacaggaagccgaagcgatcgaaagcgaagacgaagaagaggaagaggct
gacgaggaagaagaggaagacgacgacggcgccgcgcaagcgacggccaacgccgctcag
ctcgaagaactcaaacgcctgtcgctcgaaaaattcgcgctgatcagcgaatggttcgac
aagatgcgccgcgcgttcgaaaaggaaggctacaagtcgaagtcctacctgaaggcgcag
gaaaccatccaggaagagttgatgatgatccgcttcaccgcgcgtacggtggagcgtctg
tgcgacacgctgcgcgcgcaggtggacgaagtgcgtcaggtcgagcgtcagatcctgcat
acggtcgtcgacaagtgcggcatgccgcgtgccgagttcatcgcgcgttttccgggtaac
gagacggacctcgagtgggccgacaagatcgtcagcgagaaccatgcgtacagcgcgatc
ctgtcgcgtaacgtgcccgccatccgcgaacagcagcagcgtctgctggatttgcaagcg
cgcgtcgtgctgccgctgaaggatctgaaggaaaccaaccgtcagatggcggcgggcgaa
ctgaaagcgcgtcaggctaagcgcgaaatgacggaggcgaacctgcgtctcgtgatctcg
atcgcgaagaagtacacgaaccgtggcctgcagttcctcgatctgattcaggaaggcaac
atcggcctgatgaaggccgtggacaagttcgaatatcgccgtggctacaagttctcgacg
tacgcgacgtggtggatccgccaggccatcacgcgctcgatcgccgatcaggcgcgcacc
attcgcatcccggttcacatgatcgaaacgatcaacaaaatgaaccgcatctcgcgtcag
attctgcaggaaaccggcctggagccggatccggcaacgctggccgagaagatggaaatg
ccggaagacaagatccgcaagatcatgaagatcgcaaaggagccgatttcgatggaaacg
cccatcggtgacgacgacgattcgcatctcggcgacttcatcgaggacacgaatacggtc
gcgccgtcggacgccgcgctgcatgcgagcatgcgcgatgtcgtgaaggacgtgctcgat
tcgctgacgccacgcgaagcgaaggtgctgcgcatgcgttttggtatcgaaatgagcacg
gatcacacgctggaagaagtcggcaagcagttcgacgtgacgcgtgagcgtatccgtcag
atcgaggcgaaggcgctgcgcaagctgcgtcacccgagccgttcggacaagctgaagtcg
ttcctcgaagggaactag
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