Brevundimonas pondensis: IFE19_13020
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Entry
IFE19_13020 CDS
T07639
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
bpon
Brevundimonas pondensis
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_C
DNA_ligase_A_M
LysR_substrate
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
QTC87041
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Position
2602800..2604077
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AA seq
425 aa
AA seq
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MTAERSIRSRPKTTTALPAFRPVQLATLVDAVPGGNRWLHEMKYDGYRLEVVVGGSRARA
FTRSGLDWSEKFSGIVDAAASLKVDSAVLDGEAVVFDAEGRSSFQTLQGALKGEPGKIAY
VAFDLLALNGEDLSSRPLLERKALLRDLLPKTPGRLRYSDHIRGSGEKLLNSFCANGLEG
VVSKLADSRYVGARSAAWVKTKCIQRQEFVVVGWLPSDKSRAFRSLILAVNDNGALRYAG
KVGTGFDTMELQRLLEVMKPLEQDNPTVKAPRAEVRDARWLRPRLVAEIAFTEMTNEGTL
RHPSYLGLRDDKKPEAVVVEKPALETPAPGGEIVPISNAHVGLPPSVTVRIIRAGLPILL
SQVELGLGLAIIAPSALAHARLPAGLTHRPLSAKDGLSVSFAAAWYHQNDNPALRRFVSS
ARAAR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagaacgctccatacggtccagacccaagaccacgaccgccctgcccgctttt
cgtcccgtgcagctcgccacgctcgtcgacgccgtgccaggaggaaatcgctggctgcat
gagatgaagtacgatggctaccggctggaggtcgtcgtcggcggaagtcgcgctcgagcc
tttacgcgctccggactcgactggtcggagaagttttcggggatcgtcgacgccgctgcg
tccctgaaggtggactccgcggtgctcgacggcgaggctgtcgtgttcgacgccgaaggg
cgctccagcttccagacgttgcaaggcgctctgaagggcgaacccggcaagatcgcctat
gtcgctttcgaccttctcgcgcttaacggggaggatttgtcgtcgcgaccgttgctcgag
cgcaaggctcttctgcgcgacctgcttcctaagacgccgggacggctccgttactccgat
cacattcggggcagcggcgaaaagctgttgaacagcttttgcgcgaacggcctggagggg
gtggtgtccaagctggccgacagccggtacgtcggcgcgcgctcggcggcttgggtgaag
accaaatgcatccagcgtcaggagttcgttgtggtgggatggcttccctcagacaaatcg
cgcgccttccgctccttgatcctcgccgtcaatgacaacggcgccctccgctatgcaggc
aaggttggcacgggcttcgatacgatggagctgcaacggctcctggaggtcatgaaaccg
ctcgaacaggacaatcccaccgtcaaggcgccccgcgccgaggttcgggacgcccgctgg
ctccgcccccggctggtcgcggaaatcgccttcactgaaatgaccaatgaaggcacgttg
cgtcacccgagctatctcggcctgcgcgatgacaagaagcccgaagcggtcgttgtcgag
aagccggcgttggagacgccagcgccgggtggcgagattgtgccgatcagcaacgctcac
gtcggcctccccccctccgtgaccgtcaggatcatccgggccggactgccgatcctgttg
tcacaggtcgaactcggcctcgggctggcgatcatcgcgcccagcgctcttgcgcacgcc
cgtctgccggccggactgacccaccggccgctcagcgccaaggatggcctgagcgtcagc
ttcgccgcggcctggtatcatcagaacgacaacccggcgctgcgccggttcgtcagttca
gcccgcgccgcgcgctga
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