Burkholderia pseudomallei BPC006: BPC006_II1429
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Entry
BPC006_II1429 CDS
T02301
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BPC006_II1429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpq03021
]
BPC006_II1429
Transcription machinery [BR:
bpq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPC006_II1429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_7
HTH_29
GerE
HTH_Tnp_ISL3
HTH_40
HTH_20
HTH_24
DnaG_DnaB_bind
HTH_11
TnsD
Motif
Other DBs
NCBI-ProteinID:
AFR19356
LinkDB
All DBs
Position
II:1436771..1437280
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AA seq
169 aa
AA seq
DB search
MPANTLRLQREIAALYTGHRGWLHGWLSKKLGCGERAADLVHDTFIRLLARDEPIDAAEP
RAFLTTVAQRVLYNHWRRERLERAYLDALAQWPEAVAPSPETRAVLFETLVEVDRMLDGL
PAVVRRAFLLAQLDGMTHAQIAAELRVSLATVKRYLVKAGAQCYFAIAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaacactttgcgtctgcagcgggagatcgctgcgctctataccggtcatcgc
ggctggctgcacggctggctgtcgaagaagctcggctgcggcgagcgcgcggccgatctg
gttcacgacacgttcatccgcctgctcgcacgcgacgagccgatcgacgcggccgagccg
cgcgcgttcctgacgaccgtcgcgcagcgcgtgctgtacaaccactggcggcgcgagcgg
ctcgagcgcgcgtatctcgacgcgctcgcgcaatggccggaggcggtcgcgccgtcgccg
gagacacgcgccgtcctgttcgagacgctcgtcgaggtcgaccggatgctcgacgggctg
cccgccgtcgttcgccgcgcgttcctgctcgcgcagctcgacggcatgacgcacgcgcag
atcgcggccgagctgcgcgtgtcgctcgcgaccgtcaagcgctacctggtgaaagcgggc
gcgcagtgctacttcgcgatcgccgcatga
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