Beta proteobacterium CB: D521_1108
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Entry
D521_1108 CDS
T02483
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bprc
Beta proteobacterium CB
Brite
KEGG Orthology (KO) [BR:
bprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bprc03400
]
D521_1108
Enzymes [BR:
bprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D521_1108
DNA repair and recombination proteins [BR:
bprc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D521_1108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
PRO8NT
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AGG33676
UniProt:
M1SVS1
LinkDB
All DBs
Position
complement(1097299..1100781)
Genome browser
AA seq
1160 aa
AA seq
DB search
MIVSACAGSGKTWLLVARLVRLLLAGAKPQEILALTFTRKAAQEMRDRLYGLLEQFSQMT
DEQLIHELTMRGLNDAEAKKLLPQARALYLKVLMSPQSIVIDTFHGWFGRLLGAAPISAE
VQPGFNLREDAKRLQEECMQDWWGDLPADLKKHYDVLLKEFGAFETDKFLMGNYSLFKQR
GAWTFFLASCKAKGISPVDALAQCLPNLSLPNPLEEFWRRPGTKEDLQVMLECFSNGTPG
QKKSAPFVQRVIALHAAGGSVMEIADQWQSYFLTKTLTPLKDIATMSVPMRDYLAATGGD
PLQITSIRNAWVDAYEAWFSWKNDQDAYAVNAAWFAMSEAMLGHMQKAKESMRVRDFDDL
EIGVSQLMADPANAAYLQARLDAKYSHILIDEFQDTNPLQWQILRSWLEGYGQDSSRPSV
FIVGDPKQSIYRFRRADPRLFTSATTFLESTLQAKYLEKNTTRRNAHAINDAVNDIFLTD
AVPPSYVFAKQDTDWKAPLEGIAEKDFAAKGEAMLLPLIERTEQDQAERTGSALDNPIED
SGLTVGVQQRYWEGQQVSRLIHHILATRQVIDKKDGKEYWRPARASDFILLVKRRAYLPQ
FERALREAGLAYDSSRLGGLLNTLEIDDLIALLTVLVSPRHDLPLAQVLRSPIFSFTEQQ
MQELSSHVGDSYSQSENQTQTKSSWWDALQSSFDAPIQKAARYLERWRGLGEVLPVHDLL
DLIYQESNLRVSYAVASQNLARAQVLANLDAFLELALNQDGGRYPSLSRFIEEINAMRRG
DDDETPDEGDVEAEADDDIGEVDLDSEMSEEDQHKRVRLMTIHGAKGLEAPFVIMLDANH
TEWKAPNRGVLLDWSPDETSPSHLSLYTAKSLTEKRAAIYAKENEVSENENWNVLYVAMT
RAQQGLWISGVQSHIKDGISQKSWYGRALAAGMETLDAAQLGELPPQEQEKVDSNGSEPF
QINHFQLSWDAAKQSHQETIADIESGALAIAAKVKEQAQAVELPDPEILEEGTHFHKLLE
FLTVHSGTQVKTEMPSEQELMDWLNIDQEQAKKLTERVQIVMNTQALQKYLTENQWVQAW
NEIDIADKEGKGFRLDRLVEFDDHLVILDYKLTIPEAGSEAHNKYRAQLNNYKQELTRIR
PDKPNKAFLISANGEMKEIT
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtttctgcctgtgccggcagtggcaagacctggctcttggtcgcacgcctagtg
cgcctattgctcgctggcgctaaacctcaagagatcttggcgctgacctttacccgtaaa
gcagcccaagaaatgcgcgaccgcctatacggcttgctggaacagttttctcaaatgact
gatgagcaactcattcatgagctcacaatgagaggattgaacgatgcggaagcgaagaag
ttgctaccgcaagcaagggcgctgtatctgaaggtattaatgagcccccaatcgattgtg
attgataccttccatgggtggttcggtagacttctcggagcggcgccaatctccgcagaa
gtccagcctggatttaatctccgtgaagatgccaagcgcctacaagaagagtgcatgcaa
gattggtggggcgatttacctgctgatctgaaaaaacactatgacgttttactcaaagag
tttggcgcttttgagactgacaagttcttgatgggtaattacagcctctttaagcaaaga
ggtgcttggacattcttcttggcctcttgtaaagctaagggcattagtccagtcgacgct
ttagcgcaatgcttacccaatttatcgttgccaaacccgctagaagaattttggcgacgc
cctggcaccaaagaagatttacaagtgatgcttgagtgctttagtaatggcacccctggt
caaaagaaaagtgcgccatttgttcagagagtcattgcacttcatgcagcaggtggttcc
gtgatggagattgcggatcaatggcaaagctacttcttaaccaagaccctgacaccacta
aaagatattgcgacgatgtcggtacctatgcgggattatctggctgcgactggtggcgat
ccgttgcagatcacctctattcgtaatgcttgggttgatgcatatgaggcatggttctcc
tggaaaaatgatcaagatgcttatgcggtcaatgccgcttggtttgcgatgagcgaagca
atgctaggtcatatgcaaaaagctaaagagtcgatgcgtgtacgtgactttgatgaccta
gaaattggcgtgagccagttgatggccgatccggctaatgccgcttacctgcaagcaaga
ctagatgcgaagtacagtcacattctgattgatgagtttcaggataccaatccactgcaa
tggcagattttgcgttcttggctggagggttatggacaagatagctctcgtccaagcgtc
tttattgtcggagatcccaagcagtcgatctatcgcttccgccgcgctgacccaagattg
ttcactagtgcaactactttcctggagtcgactttgcaggcgaagtatttggaaaagaac
accacccgcagaaatgcgcatgcaattaatgatgcggtgaacgatatctttttaacggat
gcagttccaccgagctatgtatttgccaagcaagatactgactggaaagcaccattagag
ggtattgctgagaaggattttgccgccaagggtgaggcgatgttattgccactcattgag
cgtacagagcaggaccaagctgaacgcactggtagtgctctagataatccaattgaggat
tcagggctgactgtcggagtgcaacagcgttattgggaaggccaacaagtaagccgcttg
attcatcatattttggcaacacgccaagtaattgataaaaaagatggcaaagagtattgg
cgcccagcaagagctagtgactttatattgctcgtcaagcgccgcgcctacttgccgcaa
tttgagcgagcactgcgcgaagcaggcttggcttacgatagttctcgcttaggcggcctc
ctgaatactttagagatcgacgacttaattgccttgctcactgtcttggtatccccaagg
cacgacttgccactagcgcaagtgttgcgcagtcccatctttagctttaccgagcagcaa
atgcaggagctcagcagccatgtgggcgacagttacagtcaaagcgaaaaccaaactcaa
accaaatcatcttggtgggatgccttgcagagtagcttcgatgcccctatacaaaaggca
gcacgctatttagagcgttggagaggtctaggtgaagtattgcccgtacacgacttgctt
gatctcatttatcaagagagtaatttacgagtcagttatgcagtggcctcccaaaattta
gcacgtgcgcaggtgttggctaatttagatgccttcttggagcttgccttaaatcaagat
ggtggtcgctatccgagcttgagtcgctttatcgaagagattaatgcgatgcgtcggggt
gatgatgacgagaccccggatgagggcgatgtagaggctgaggctgacgatgacattggt
gaggtggatctcgatagcgagatgtcggaggaagatcaacataagcgcgtgcgcttaatg
actattcatggggctaaaggtttagaggcgccatttgtgatcatgctcgatgccaaccat
acagagtggaaagcacccaatcgtggcgtactacttgattggtctccagatgagacgagt
ccaagccatctgtctctgtataccgcaaagtctttgacagagaagcgtgcagcaatctac
gcaaaagagaatgaagttagtgagaatgaaaattggaacgtcctgtacgtagcgatgact
cgcgcacagcaaggcttatggattagcggcgtccaatctcatatcaaggacggcattagt
caaaaatcttggtatggcagagcgcttgcggcaggcatggagaccttagatgccgcccag
ttaggcgaactgccacctcaagaacaggagaaggtggattccaatggtagtgagccattt
cagataaatcatttccaattgtcatgggatgcagccaaacaatctcatcaagaaacaatt
gccgatattgaaagtggcgcactagcgattgctgcaaaagtaaaagagcaggcgcaagcc
gtagagctgcccgacccagagattttggaagaaggaacgcatttccataaattgctagag
ttcttaactgtgcactcaggtacgcaggtaaagacagaaatgccaagcgagcaagaatta
atggattggctcaacatcgatcaagaacaggccaaaaaactgactgagcgcgtccagatt
gtgatgaatacacaagcgctccaaaagtacctcaccgaaaaccagtgggttcaagcttgg
aatgagatcgatatcgctgataaggaaggcaagggcttccgcttagatcgcctagtagag
tttgatgaccacttggtcatcctcgattacaagctcaccattcctgaagcaggtagcgaa
gcgcataacaaataccgtgcacagctcaataactacaaacaagagctaaccagaatacgt
ccggataagccaaataaagcctttttaatctctgcaaacggtgagatgaaagaaattact
taa
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