Burkholderia pseudomallei NAU35A-3: BBU_1070
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Entry
BBU_1070 CDS
T03476
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bpsa
Burkholderia pseudomallei NAU35A-3
Pathway
bpsa03030
DNA replication
bpsa03430
Mismatch repair
bpsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBU_1070 (dnaE)
03430 Mismatch repair
BBU_1070 (dnaE)
03440 Homologous recombination
BBU_1070 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsa03032
]
BBU_1070 (dnaE)
03400 DNA repair and recombination proteins [BR:
bpsa03400
]
BBU_1070 (dnaE)
Enzymes [BR:
bpsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBU_1070 (dnaE)
DNA replication proteins [BR:
bpsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBU_1070 (dnaE)
DNA repair and recombination proteins [BR:
bpsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBU_1070 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Nitr_red_assoc
Motif
Other DBs
NCBI-ProteinID:
AIS86249
LinkDB
All DBs
Position
1:complement(1292264..1295788)
Genome browser
AA seq
1174 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRLDDIVKSAAEDGQGALALTDLGNAFGLVRFYKEARDA
GIKPIAGCDVWITNHDDRDKPSRLLLLVKDKRGYLNLCELLSKAWLTNQYRGRAELDASW
LEGELAEGLLALSGAQQGDIGLALAAGNEAAARRHAQRWARVFPGGFYIELQRYGQPGAE
AYIQQAVAIAAELKLPVVATHPLQYMTADDFTAHEARVCISEGDILANPRRQKRFTTEQF
FRTQGDMAALFADLPSALANTVEIAKRCNLTLELGKPKLPRFPTPDGMSLDDYLVQLSQE
GLDKRLVQLYPDEAEREAQRGKYNQRLDFECGTIKKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYSLGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPLLQERYDNEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDEGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKENWSLAQVPLDDPTSFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCLVNGLAVLPPDINRSNYRFEPVAEADGKRSRTIRYGLGAIK
GSGQNAIEEILRAREEKPFADLFDFCERIDRRVVNRRTIEAMIRAGAFDSLHENRAQLLA
SVPLAMEAAEQAAANALQAGLFDIGGVPAHQHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKLGELKEGRDKVVAGVIASLRTQMTQRGKMVIALLDDGTGQCEVT
VFNEQFDANRALFKEDELLIVQGQARNDAFTGGIRFTAESVMDLERARSRYAQAVRMTMN
GNADAAALRRVLEAHVAKPDETPPAAAPAPRGGRDGGRRAQAAIPNGLAVRIAYSNARAQ
GEMRLGDAWRVKPSDALLADLRAAFGGSVVEIVY
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgtttcgttcacctccgcgtccactccgaattctcgattgccgacggc
atcgtgcgtctcgacgatatcgtcaagtcggcggccgaagacggtcagggcgcgcttgca
ctgaccgacctcggcaacgcgttcggtctcgtccgtttctacaaggaagcccgcgatgcg
ggcatcaagccgatcgccggctgcgatgtctggatcaccaaccacgacgatcgcgacaag
ccgtcgcggctgctgctgctcgtcaaggacaagcgcggctacctgaacctctgcgagctg
ctgtcgaaggcgtggctcacgaaccaataccgcggccgcgcggagctcgacgcgagctgg
ctcgaaggcgagctcgccgaagggctgctcgcgctgtcaggcgcgcagcagggcgacatc
ggcctcgcgctcgcggcgggcaacgaggcggccgcgcgccgccacgcgcagcgctgggcg
cgggtgttcccgggcggtttctatatcgaattgcagcgctacggccagccgggcgcggaa
gcgtacatccagcaggcggtggcgatcgcggcggagctgaagctgcccgtcgtcgcgacg
catccgctgcagtacatgacggccgacgatttcaccgcgcacgaggcgcgcgtgtgcatc
tcggaaggcgacatcctcgcgaatccgcgccgccagaaacgcttcacgaccgagcagttc
ttccgcacgcagggcgacatggccgcgctgttcgccgatctgccctcggcgctcgcgaac
acggtcgagatcgccaagcgctgcaacctgacgctcgagctcggcaagccgaagctgccg
cggttcccgacgcccgacggcatgtcgctcgacgactacctcgtgcagttgtcgcaggaa
gggctcgacaaacgcctcgtgcagctctacccggacgaggccgagcgcgaagcgcaacgc
gggaagtacaaccagcgtctcgatttcgagtgcggcacgatcaagaagatgggctttccg
ggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggcgtgccggtg
ggtcccgggcggggctcgggcgcgggctcgctcgtcgcgtattcgctcggcatcaccgat
ctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaacccggagcgggtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatccagtacgtg
aaggagaagtacggcgcggacgcggtgtcgcagatcgccaccttcggcacgatggccgcg
aaggcggccgtgcgggatatcggccgggtgctcgatctcggctacatgttcaccgacggc
gtcgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaag
gaagagccgctcctgcaggagcgctacgacaacgaggacgaagtccatcagttgctcgat
ctcgcgcagcgcgtggagggcctcacgcgcaacgtcgggatgcacgcgggcggcgtgctg
atcgcgcccggcaagctgaccgatttctgccccctctacacgcagggcgacgaaggcggc
gtcgtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctcggcctcacgacgctcacgattctcgactgggccgagcgctacattcgccgtctcgat
ccgagcaaggagaactggtcgctcgcgcaggtgccgctcgacgatccgacgtcgttccag
atcctcaagaaggccaacacggtcgccgtgttccagctggaaagccgcggcatgcagggg
atgctgaaggacgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cggccgggcccgatggacctgattccgagcttctgcgcgcgcaagcacgggcgcgagaag
gtcgactatccggatccgcgcgtcgagcctgtcctgaaagagacctacgggatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctattcgctcggcggcgcg
gacttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcatcgcgag
atcttcgccgagggcgccgcgaagaacggcctcacgcgcgagaagtccgacgagatcttc
gacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtacgcg
ctgctcgcgtattacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcctc
gtcaacggcctcgccgtgctgccgcccgacatcaaccgctcgaactatcgcttcgagccc
gtcgccgaggccgacggcaaacgctcgcgcacgatccgctacggcctcggcgcgatcaag
ggcagcggccagaacgcgatcgaggagatcctgcgcgcacgcgaggaaaagccgttcgcc
gatctgttcgatttctgcgagcggatcgaccgccgcgtcgtgaaccgccgcacgatcgaa
gcgatgattcgcgcgggcgcattcgattcgctgcacgagaatcgcgcgcagttgctcgca
tcggtgccgctcgcgatggaggccgccgagcaggcggccgcgaacgcgctgcaggcgggc
ctgttcgacatcggcggcgtgcccgcgcaccagcatgcgctcgtcgacgagcccgcgtgg
gacgacaagcgtcgcctgcaggaagagaagggcgcgctcggcttctacctgtccggccac
ctgttcgacgcgtatcgcgacgaggtgcgccgtttcgtgcgccagaagctcggcgagctg
aaggaagggcgcgacaaggtggtggccggcgtgatcgcgtcgttgcgcacgcagatgacg
cagcgcggcaagatggtgatcgcgttgctcgacgacggcaccggccagtgcgaagtcacc
gtgttcaacgagcagttcgacgcgaaccgcgcgctcttcaaggaggacgagctgctgatc
gtccaggggcaggcgcgcaacgacgcgttcacgggcggaattcgcttcaccgccgagtcg
gtgatggacctcgagcgtgcgcgcagccgctacgcgcaggcggtgcggatgacgatgaac
ggcaacgcggacgcggcggcgctgcgccgcgtgctggaagcgcacgtcgcgaaacccgac
gagacgccgcccgccgcggcgccggcgccgcgcggcggtcgcgacggcgggcggcgggcg
caggcggcgataccgaatggtctcgccgtgcggatcgcatacagcaacgcgcgtgcgcaa
ggcgagatgcgcctgggcgacgcatggcgcgtgaagccgagcgacgcgttgctcgccgat
ctgcgcgcggcgttcggcggcagcgtcgtcgagatcgtctactga
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integrated database retrieval system
