Burkholderia pseudomallei MSHR146: BBN_1280
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Entry
BBN_1280 CDS
T03024
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpsu
Burkholderia pseudomallei MSHR146
Pathway
bpsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBN_1280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsu03400
]
BBN_1280
Enzymes [BR:
bpsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BBN_1280
DNA repair and recombination proteins [BR:
bpsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBN_1280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHG69252
LinkDB
All DBs
Position
1:1419688..1421055
Genome browser
AA seq
455 aa
AA seq
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MAWTEAALEELGLAPAWVRRDAARAADVNEAAAHAAGETAVAAVARGAQPASPDAPREPA
RRIARDGGRDGGRDGASGDAGSASPNDAAHAMARVAGAEASAAAAVADERAALARQAGDG
RGQARQAAAESGVRAAADAPAPAAAPESRTRDATIARGASPDEPGVAGVVGVVGVADEPS
VAGGERRARTSGGGADVPASALDWTDAAEATRPAAAPAPAALTGGDAGAAASDEDMSWFD
LEPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHAD
WMLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEP
DEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIASMRGRVHQYEGVPVIVTYH
PAYLLRSLQDKAKAWSDLCLANDTYRSAAPAADPP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcatggactgaagcggcgctcgaagaactggggctcgcgcccgcgtgggtgcggcgc
gacgcggcgcgcgctgcggacgtgaacgaggcggccgcgcacgcggccggagaaaccgcg
gtcgcggcggttgcgcgaggagcgcagccggcgtcgccggatgcgccgcgcgagccggcg
cgtcggatcgcgcgcgatggtgggcgcgacggcgggcgcgacggcgcgagtggcgacgcg
ggatcggcgtcgccgaacgacgcggcgcatgcgatggcgcgtgtcgcgggcgcggaagcg
agcgcagccgccgccgtcgccgacgaacgcgcggcgcttgcgcggcaggccggcgacggg
cgcggacaggcgcggcaagcggcggccgaatccggcgtgcgggcggcggcggatgcgccc
gcgccggccgcggcgcccgaatcgcgaacgcgggatgcgacgattgcgcgcggggcttcg
ccggacgagccgggcgtggcaggcgtggtgggcgtggtgggcgtggcggacgagccgagc
gtggcgggcggcgaacgccgcgcgcggacgagcggcggcggcgcggacgtgccggcgagc
gcgcttgactggacggatgcggccgaggcaacgcgtccggcggcggcgcccgcgccggcc
gcgctcaccggtggcgatgccggcgcggcggcgtccgacgaggacatgtcgtggttcgat
ctcgaaccggtgcacgagcccgtgctgccggacgttgccgcacggcccgccgccactacg
ccgtccgtcgccgagctcggctgggacgaactgcgcgcgcgcgtcgccgactgcgcgcgc
tgccgcctctgcgaaaagcgcacgaacacggtgttcggtgtcggtgacgagcacgccgac
tggatgctcgtcggcgaggcgcccggcgagaacgaggacaagcaaggcgagccgttcgtc
ggccaggcgggcaagctgctcgacaacatgctgcgcgcgctggcgctcaagcgcggcgag
aacgtctacatcgcgaacgtgatcaagtgccggccgcccggcaaccgcaatccggagccc
gacgaggtcgcgcgctgcgagccgtatctgcagcggcaggtcgcgctcgtgaagccgaag
ctgatcgtcgcgctcggccgcttcgccgcgcagacgctgctcaagacggacggaagcatc
gcttcgatgcgcgggcgcgtgcatcagtacgaaggcgtgcccgtgatcgtcacgtaccat
ccggcgtatctgctgcgcagcctgcaggacaaggcgaaggcctggtccgatctgtgtttg
gcgaacgatacctaccggagtgccgcgcccgccgccgatccgccatga
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