KEGG   Bombus pyrosoma: 122566135
Entry
122566135         CDS       T07776                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bpyo  Bombus pyrosoma
Pathway
bpyo03030  DNA replication
bpyo03410  Base excision repair
bpyo03420  Nucleotide excision repair
bpyo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpyo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122566135
   03410 Base excision repair
    122566135
   03420 Nucleotide excision repair
    122566135
   03430 Mismatch repair
    122566135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpyo03032]
    122566135
   03400 DNA repair and recombination proteins [BR:bpyo03400]
    122566135
Enzymes [BR:bpyo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     122566135
    6.5.1.6  DNA ligase (ATP or NAD+)
     122566135
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     122566135
DNA replication proteins [BR:bpyo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122566135
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     122566135
DNA repair and recombination proteins [BR:bpyo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     122566135
   NER (nucleotide excision repair)
    Other NER factors
     122566135
   MMR (mismatch excision repair)
    Other MMR factors
     122566135
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 122566135
NCBI-ProteinID: XP_043578878
LinkDB
Position
LG3:4402897..4407973
AA seq 954 aa
MYTRIAFNLRSIVFNNTYSRPVIFLSKQFQLNNAFFPIVNNVLNRILANSKIVKNGDQSN
SGNPKRKRDDSGDRSETASPPTGNSSRKKSVSKSPSPLKKVNGTPKIKLSPTATTKEKEK
RKSKTPLTTTKKKRKANEVKSTPKKSDAKKKLKDVLSDEDQKENELTVEKKTETSGEFES
SKSSPKEFKTKKNVKNSEKKGTKKRSRIIARVDSSDEEEHNLLPESPKKANLDVEENNPV
NEEENSDEDILDNQKDSEEEEKKKEDNVEKPAKKIHNFLAPKEKENTNNTDKDKKKSSSH
SYKPSASKYDPINDAFWKQGEKVPYIALTRTLELIEDTSARLKIIEILSNYFRSVIVLSP
DDLLPSIYLCLNQLAPAYEGIELGVAETNLMKAIAQCTGRTLAQIKADVQTVGDLGIVAE
GSRSNQRTMFQPAPLTVSNVYTRLKEIAQMTGSASLTKKLDKIQSLFVACRFTEARYLIR
SLAGKLRIGLAEQSVLQALALACTMTPPIQSYPPEVLDVSKKMSSDAFKQKYDETALTLK
TTYCECPNYDKIIPVLLKEGVEELPSKCKITPGIPMKPMLAHPTKGVQEVLTRFDGLKFT
CEWKYDGERAQIHLAEDGKISIYSRNQENNTSKYPDIIGRFKNTQGEEVKSCILDCEAVA
WDNENKQILPFQILSTRKRKDANEADIKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKK
NFKEVIGEWKFATSLDTSTMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLK
LKKDYLEGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSICKIGTGFSEED
LQKHTEFFKEHIIPQTKSYYRYDSSLVPDHWFEPVQVWEIKCADLSLSPVHKAAVGIIDP
EKGISLRFPRFVRIRDDKNNEDATSAQQVANMYNSQEQIKNQTSSTKVAEEDFY
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgtatactcgtattgcgtttaatttgagatcaattgtattcaataatacttattcgcga
cctgtgatatttttaagtaaacaattccaattgaataatgcttttttccctattgtaaat
aatgttcttaatcggatactcgctaatagcaaaattgtaaagaatggagaccaaagcaat
tcgggaaaccctaaacgaaaaagagacgatagtggagataggagtgaaactgccagtcca
cctactggaaattcctcaaggaagaaatcagtctcaaaatctccttcaccactgaagaaa
gtaaatggaacaccaaaaattaagctatcaccaacagcaacaactaaggaaaaggaaaaa
agaaaaagtaaaactccacttactactactaaaaagaaaagaaaagccaatgaagtaaaa
agtacccctaagaagagcgatgcaaagaagaaattgaaagatgtgttaagtgatgaggac
cagaaagaaaatgagttgactgtagaaaagaaaacagaaacaagtggcgaatttgaatct
tcaaagtcttcgcctaaggaatttaaaactaaaaagaatgttaaaaatagtgaaaagaaa
ggtactaaaaaaaggtcaaggataatagcacgtgtcgattccagtgacgaagaagaacat
aatctattgccagagagtcccaaaaaagcaaatcttgatgtagaggaaaataacccagtt
aacgaagaagaaaattctgatgaggacattctagataatcaaaaggacagcgaagaagaa
gaaaagaaaaaagaggacaatgtagagaagcctgcgaaaaagatacataattttcttgct
ccaaaagagaaagaaaatacaaataatactgataaagataagaaaaagtcctccagtcac
tcttataaacctagtgcctctaaatatgacccaataaatgatgcattttggaaacaggga
gaaaaagtaccatatattgcgttgacacgtacgttggaattgatcgaagatacaagcgct
cgattaaaaataatagaaattttatcaaattatttccgatctgtaatagttttaagccca
gatgacttacttccaagcatatatttatgtctcaatcaattagcacctgcttatgaaggg
attgaattaggggtggcagaaacaaatttgatgaaagctatagcacaatgtactggtaga
acattagctcaaattaaagcagacgtccaaacagttggggatttgggaatcgtggcagaa
ggaagtcgttccaatcaaagaactatgtttcaacctgctccactgacagtatcgaatgta
tatactaggctgaaagagatcgcacaaatgactggttctgcgtctttaactaaaaaattg
gataaaattcagtcgctttttgtagcgtgtcggtttactgaagccagatatctgattcgg
tccctagccggcaaacttcgaattggtctagctgaacaatctgtgttacaagctttggca
ctagcgtgtactatgacaccaccaatacagagttatccaccggaagttttagacgtgagt
aagaaaatgtcaagcgatgcctttaaacaaaagtacgacgaaactgcgcttactcttaaa
acaacatattgtgaatgtccaaattatgacaaaataattcctgttttactaaaagagggg
gttgaagaattaccaagcaaatgtaaaattacacctggcatacctatgaagccaatgttg
gcacatcctactaaaggtgtgcaagaagtattaacgcgtttcgatggattgaaatttact
tgtgaatggaaatacgatggagaaagagcgcagattcatttagccgaggatggtaaaatt
agtatttacagtaggaatcaagaaaacaataccagcaaatatcctgatattataggaaga
tttaaaaatactcaaggtgaagaagttaaaagttgtatccttgactgtgaagcagtagcc
tgggataacgagaataaacaaatcctaccttttcaaatactcagtacaagaaaacgcaag
gatgcgaacgaagcagatattaaagttcaagtatgtgtgttcatgtttgatttattatat
ttaaatggagaaccactggtacaacaacctttcataaaacgtcgtgaattattgaaaaag
aatttcaaagaagtaattggagaatggaaatttgcaactagtttagatacttcgactatg
gaacaagtgcaagatttcttagatgaatcagtcaaaggcaattgcgagggccttatggtg
aagaccttagaacaggatgcaacatatgagattgctaagcgttctcggaattggttaaaa
ttgaagaaagattatttagaaggtgtgggtgatacattagacgtggttgtcattggtggc
tatataggaaaaggaaaaaggacaggaacctatggaggatttcttttagcttgttatgac
caagagaatgaggaatatcaaagtatttgtaagattggtactggattcagtgaagaagat
cttcaaaagcacacagagttcttcaaagaacatataataccacaaactaagtcctactat
cgttatgactcgtctctcgtacctgatcactggttcgaaccagttcaagtgtgggaaatt
aaatgcgcagatctttctttgtcacctgttcataaggcagccgttggtattattgatcca
gagaaaggaatatctttgcgatttccacgttttgtccgcattcgcgacgataaaaacaac
gaggatgctacatcagcgcaacaagttgcaaatatgtacaatagtcaagagcagataaaa
aatcagacatcatcaacaaaagtagctgaagaagacttttattga

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