Bombus pyrosoma: 122569428
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Entry
122569428 CDS
T07776
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03022
Basal transcription factors
bpyo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122569428
09124 Replication and repair
03420 Nucleotide excision repair
122569428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpyo03021
]
122569428
03400 DNA repair and recombination proteins [BR:
bpyo03400
]
122569428
Transcription machinery [BR:
bpyo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122569428
DNA repair and recombination proteins [BR:
bpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122569428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
Motif
Other DBs
NCBI-GeneID:
122569428
NCBI-ProteinID:
XP_043586409
LinkDB
All DBs
Position
LG7:3832048..3834558
Genome browser
AA seq
400 aa
AA seq
DB search
MADEEEEKEYRWETGYEKTWEAIKEDDHGLLEASVADIIHNAKRKRQMEKKVGARLGMMR
HLYVILDASESMSLQDLKPTRFLCSLKLLEDFIEEFFYQNPISQLGVIITRNKRAEKVSE
LAGNSKKHVKEVQNMQQIAPVGEPSLQNSIELALKSLRLLPSHASKEILIIVGALTTCDP
GDINETIQNMKTDSVRCSVIGLAAELYICKRMATATGGEHGVALDDKHYKEQLNMHIDPP
PAATRLDAALVKMGFPHHALHSSANDSAMAVCMCHAESSDESVKLLSTGYLCPQCLSKHC
ELPVECRACGLTLVSAPHLARSYHYLFPVESFKEVVFSGTPSTCYGCQKILSQKDKKVYI
CNKCNETFCLDCEIFIHESLHTCPGCATNPYTYQKSTDRN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagaagaagagaaagagtatagatgggagactggttatgaaaagacatgg
gaagcaatcaaagaagatgatcatggattgttggaagcttcagttgcagatattattcac
aatgcaaaaagaaaacgtcaaatggaaaagaaggttggtgccagattagggatgatgagg
cacctttatgtaattcttgatgcttctgaatcaatgtcacttcaagatttgaaaccaact
cgttttctatgttccttaaagctgttagaagattttattgaagaattcttttatcaaaat
cctataagtcagttaggagtaattatcacaaggaataagagagcagaaaaagtaagcgaa
ttagctggaaattctaaaaaacatgtgaaggaagtacaaaacatgcaacaaattgcacca
gtaggtgaaccttcattgcaaaactccatagagttagctttgaagtcattacgtctccta
ccatcacatgctagcaaagaaatacttataatagtaggagcacttacaacatgtgatcca
ggagatatcaatgaaactatacaaaacatgaagacagattctgtcaggtgcagtgtgata
ggtttggctgctgaactatatatttgtaaaagaatggcaacagcaactggtggagagcat
ggtgttgcattggatgataaacattacaaggaacagttaaatatgcacatagatcctcct
ccagctgcaactaggttagatgctgctcttgtaaaaatgggtttccctcatcatgcatta
cattcttctgcaaatgattcagctatggcagtttgcatgtgtcatgcagaaagttcagat
gaatctgttaaacttcttagtacaggatatctctgtcctcagtgtttgagcaaacattgt
gaacttccagtagaatgcagagcatgtggattaacattggtgtctgctccacatttagca
cggtcctatcattatttattccctgttgaatcttttaaggaagttgtattcagtggaact
ccttcaacttgttatggttgtcagaagatattgtcacaaaaagataagaaggtatatatt
tgtaataaatgtaatgagacattttgcttagactgtgaaatatttattcacgaatcttta
catacatgtcctggctgtgctactaatccatatacatatcaaaagtccacagatagaaat
taa
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