Bombus pyrosoma: 122570466
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Entry
122570466 CDS
T07776
Name
(RefSeq) la-related protein Larp4B isoform X1
KO
K18763
la-related protein 4
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122570466
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122570466
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Gene cluster
GFIT
Motif
Pfam:
La
RRM_1
SET_assoc
RRM_3
Motif
Other DBs
NCBI-GeneID:
122570466
NCBI-ProteinID:
XP_043588729
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Position
LG9:complement(5604035..5617101)
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AA seq
762 aa
AA seq
DB search
MNGDFGYVYMNGDIGKLPPGAVYPATPEPLGSVGGAIGSTASNLEYNIMNGVPSGNELIL
EAAVGNLEPTLQHAIGIGGAAGYGPVDVAPLGDVPNQPAPMGDISAPGIPLEQLKQMLSS
QLEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQV
DEEGQKVRPNHKRCIVILREIPDNTPLEDVKNLFSGEGCPRFISCEFAHNSSWYVTFESD
EDAQKAYRFLREEVREFQGKPIMARIKAKPMNRLPIPAVASVGGIKNGYRTTPPPPPVYD
PNSYTAGQQRFLYTNGTTMPQTTMPPYANQVHVYHQPFYPPGMMPWGPASPAYFDMSGVF
MNGITPHNTFKPHNRYNPRHRNKQRNGSERPGLMDGGGNMVPMGRTSHPPISGAPISLGA
AVPTFTSSLPTVKPTSSSYQTGTKFHSSHTTVATGETHYNSSHSKGSQENDAQTLDSGVQ
FPRHRMHRRTKDQESLSKANSSPLPSIRESTPASNNNTQCNRGVQFDLEASAFPPLPGLD
ADLAKSHNASVETVGTDCTQSQNRLSDVVKGTAKLKSVKEKEPTGTSQQYHQQPTSNSSR
SASPGSSAGGHAGLLEAPTGSSSTSTTTSVASTNVSSNASASNNDSTDIALSTITLTPPS
SPDKFSPLLLKCTADRSVKTDDSNMVNGVDEAVSNAHTVEDSEQVSRCECNIPTASQNSQ
SQVGGTSTFPVDLTRPSYAQVAQHCRELPCTKHKTDERDGNV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatttcgggtacgtgtacatgaatggggacatcgggaagctcccaccaggg
gcggtctatccagccacccctgaacctttgggttctgttgggggtgcaattggaagtact
gcatccaatctggaatataacatcatgaacggagttccaagtggaaatgaattaatattg
gaggcagctgttggtaatttggaacctacattgcaacacgctattggtatagggggtgca
gcaggttacggtccagtagacgttgctcccttaggtgatgtgccaaatcaacctgctcca
atgggtgacatatctgcccctggtataccgttggaacaacttaaacaaatgctctcttca
caacttgaatattatttttccagggagaatttagctaatgatacatatttattatcacaa
atggataatgatcaatatgtaccaatatggacagtagcaaatttcaatcaagtgaaaaaa
ttgacaaaagatataaaacttataacggaagttctaagagaatccccaaatgtacaagtt
gatgaagaagggcagaaagtaagacctaaccacaaacgatgtattgtaattcttcgtgaa
ataccagacaatacgccattggaagatgtaaagaatttattctctggggaaggatgtcca
aggtttatttcatgtgaatttgcccataatagttcttggtatgtaacttttgaatctgat
gaagatgctcaaaaggcctacaggtttttacgtgaggaagttcgggagtttcagggaaag
ccaataatggctagaatcaaagctaaaccaatgaataggctaccaatcccggcagttgca
agtgtgggtggtattaaaaatggttatagaacaacaccaccaccaccgcctgtttatgat
ccaaatagctatacagctggacagcaacgcttcctttatacaaatggtactactatgcca
caaactacaatgccgccatatgccaatcaggttcatgtatatcatcaaccattttatcct
cctggaatgatgccttggggacctgcgagtcccgcttactttgatatgtcaggtgttttt
atgaatggtattacaccacataacacgtttaaaccacataacagatacaatcctcgtcac
agaaataagcaaagaaatggatctgaaaggccaggcttaatggatggtggcggtaatatg
gtgccaatgggacgtacttcacatccgcctataagtggggcaccaatatctttaggagca
gcagttccgacttttacttcgagcttgcctacggtgaagccaacttcttcttcctaccag
accggcacaaagttccattcctcacatacaaccgtagcaactggagagacccattataat
agcagtcattcgaaaggatcccaagaaaatgacgcgcaaactctggattctggagtacaa
tttccgcgtcaccgtatgcatcgtaggaccaaagaccaagagtcattatcaaaggctaat
agtagccctttaccgtcaatcagagaatctaccccggccagtaataataacacacaatgc
aaccgaggggtacaattcgatttggaagcttctgctttccctcctcttcctggcctagat
gctgatcttgcaaaatcccataatgcttcagtagaaactgttggtacagattgtacgcaa
tcgcagaataggctttcagatgtagttaaaggtactgcaaaattgaaaagcgtcaaagaa
aaagaacctacaggaacttcacaacaataccatcaacaaccaacaagtaacagcagtagg
tctgcaagtccagggtcaagtgctggtggtcatgctggtttgctagaagctccaactggt
tctagcagtacatcaacaactacttccgttgcatctacaaatgtcagctctaatgcttct
gctagcaacaatgactccacagacatcgctctcagcaccatcactctcactcccccgtca
tctcctgataagtttagtcctttattattgaaatgcaccgctgacagatctgtaaagact
gacgattcaaacatggtgaatggagtggacgaggctgtttcaaatgcacacacagtggaa
gattctgaacaagtatctaggtgtgaatgtaatatccctactgcctcacaaaattcccag
tcacaagtgggaggaacttctactttccctgtagatcttacaagaccgagttatgctcaa
gtagcacaacactgtcgcgaattaccttgtacaaaacataagacagatgaaagggatgga
aatgtgtaa
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