Bombus pyrosoma: 122572714
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Entry
122572714 CDS
T07776
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03013
Nucleocytoplasmic transport
bpyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122572714
09122 Translation
03013 Nucleocytoplasmic transport
122572714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122572714
03041 Spliceosome [BR:
bpyo03041
]
122572714
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122572714
Spliceosome [BR:
bpyo03041
]
Complex C
Other components
EJC/TREX
122572714
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122572714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
122572714
NCBI-ProteinID:
XP_043593991
LinkDB
All DBs
Position
LG11:3982696..3985887
Genome browser
AA seq
664 aa
AA seq
DB search
MAMFEVLRKEYSDYLQQCFKLSDIQIFQKKCVERCTNDSDRKAAIDQALRDTLLVILSEN
VSSNVPLLETYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVVVWK
EDLFFSACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NHTEFGSEKSEGDDLEQITKDDDKSETKVPIDYNLYRKFWALQDFFRNPNQLYLKMHWKI
FSTHASSVLSAFSSFKLEEQRNYPSTCVKVESSMEGSHKETPYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLILFQYLNSTVKFKAFLASGYETSETHELKPDQVEWVKGTTEQVYALLT
ETPPDGPTFAETVKNILKREEHWNAWKNEGCPPFKRPTPDSSADIEESKKPKRPRRRIGD
VIRDAQAVGKYHMGNPELTKLWNLCPNNLEACKSKERDFLPSLETYFEEAIMQLDPNAMV
EDEYKKVNDGNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDI
KLETEETPPPEANDQEFNEDVLKQESEQVEAENTDTKGRKLTKVTPDMVAKLSEILKNDW
KKLATKFGYTSEEITFFQGKPTPYEQCKNMLEIWAEEDVDASMENLAYILEGLKFTEALA
VLKS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttcgaagttttaagaaaagaatatagtgattatttgcaacagtgttttaag
ctgtcagatatacaaatatttcaaaagaaatgcgtcgaacggtgtacaaacgatagtgat
agaaaagctgcaattgatcaagcactaagggatactcttcttgtaatattatctgaaaat
gtatcaagtaatgtgcctctacttgagacctatattacattctgcattgagttatgcaga
aaagacttagcaactgcaagtatgccagtgatgctacttggtgatatatttgattctatg
acactcgatagatgcgaacagttgtttacttttgtcgagaacaatgtggttgtgtggaaa
gaagatttattctttagtgcctgtaaaaacaatttgttaagaatgtgcaatgacttactt
agaaggttatctagatcacaacaaactgtattttgtggaagaattcttttatttctggct
aagttttttcctttttctgagaggtctggtcttaatattgttagtgaatttaatttggag
aatcatacagaatttggctctgaaaaatcagagggagacgatttggaacaaataactaag
gatgatgataaatcagaaactaaagtgccaattgattataatttatatagaaaattttgg
gcactccaagattttttcagaaatcccaatcagttatacttaaaaatgcactggaagata
ttttcaacgcatgcttcaagtgtactgtcagcattttcatcttttaaattggaagaacaa
cgtaattatccttcaacatgtgttaaagttgagtcttccatggagggatctcataaggaa
accccttatttcgcaaaatatttaacaaatcaaaaattgttggaactacaactatctgat
tcaaatttcagacgatatgtattgctgcagtttctcattcttttccaatatcttaatagc
actgttaaatttaaagccttccttgccagtggctatgagacaagtgaaacacatgaacta
aagcctgaccaagtagaatgggtaaaaggaaccacagagcaagtatatgccttactgaca
gaaacacctcccgatggtccaacatttgcagaaactgttaaaaatatattaaaacgcgaa
gagcactggaatgcttggaaaaatgaaggatgcccaccatttaaaagaccaactccagat
tctagtgccgacatagaggaatcaaaaaaaccaaagaggccaaggcgtagaattggagat
gtcattagagatgctcaagcagtaggaaaatatcatatgggaaacccagaactcacaaaa
ttatggaacttatgtcccaataatcttgaagcatgtaaatctaaagaaagagacttcctt
ccatctttagagacatattttgaagaagctattatgcaattagatcctaatgcaatggta
gaagatgaatacaaaaaagtaaacgatgggaattttggttggcgagcattgagactacta
gctagacgtagtcctcatttttttgtccatgggaattatcctattaataaattacctgaa
tatctcgaaacaatgattaaaaaaatcgctaaagatcggccacagacacagtcggatata
aaattagaaacagaggagactccaccgccagaagcgaacgatcaagagtttaacgaagat
gttcttaagcaagagagtgaacaagtcgaagccgaaaatacggatacgaaaggacgaaaa
ttaacgaaagtgacacctgacatggtggcgaaattatcagaaattctgaaaaacgattgg
aaaaagttagcaaccaagtttggttatacgagtgaagagattacattttttcaagggaaa
ccaacgccgtacgagcaatgtaaaaatatgttggaaatttgggcggaagaagatgtagat
gcatcgatggaaaatttagcatatattttagaaggtttaaaattcacggaagcgctggct
gttttaaaatcctaa
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