Bradyrhizobium sp. ORS 278: BRADO7027
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Entry
BRADO7027 CDS
T00516
Symbol
rfbC
Name
(GenBank) dTDP-4,deoxyrhamnose 3,5 epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
bra
Bradyrhizobium sp. ORS 278
Pathway
bra00521
Streptomycin biosynthesis
bra00523
Polyketide sugar unit biosynthesis
bra00541
O-Antigen nucleotide sugar biosynthesis
bra01100
Metabolic pathways
bra01110
Biosynthesis of secondary metabolites
bra01250
Biosynthesis of nucleotide sugars
Module
bra_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BRADO7027 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BRADO7027 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BRADO7027 (rfbC)
Enzymes [BR:
bra01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BRADO7027 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAL80613
RhizoBase:
BRADO7027
UniProt:
A4Z387
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All DBs
Position
complement(7330892..7331446)
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AA seq
184 aa
AA seq
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MNVIKTDLPEVIILEPKLFGDHRGFFLETFQAARYRELGINGPFVQDNMSRSSYGVLRGL
HLQNPNTQGKLVSAMRGRVLDVAVDVRVGSPNFGKHVAVELSEENRRQLWVPRGFAHGFV
VLSESADFFYKCDDYYSPKDEMSVRWNDPAIGIDWGVPEPKLSPKDAEAPLLAEARNLPV
YGQI
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcatcaaaaccgacttgcctgaagttatcattctcgagccgaagctgttcggt
gaccaccgaggtttcttcctggagacgttccaggccgcccgctaccgcgagctcggtatc
aacgggccgttcgtgcaggacaacatgtcccgctcgtcctatggcgtgctgcgcgggctg
catctgcagaacccgaacacgcaaggcaagctggtcagcgcgatgcgcggccgggtgctg
gacgtggcggtcgatgtgcgcgtcggcagcccgaatttcggcaagcatgtcgccgtggaa
ctgtcggaggagaaccgccgccagctctgggttccccgcggcttcgcccacggcttcgtc
gtgctctcggagagcgcggatttcttctacaaatgcgacgactattacagtcccaaggac
gagatgtcggtgcgctggaacgatccggcgatcggcatcgactggggcgtgccagagccg
aagctgtcgcccaaggacgccgaggcgccgctgctggcggaggcccggaatcttcccgtg
tacgggcagatctga
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