Brevundimonas sp. DS20: JL11_03460
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Entry
JL11_03460 CDS
T04101
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
brd
Brevundimonas sp. DS20
Pathway
brd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JL11_03460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brd03400
]
JL11_03460
Enzymes [BR:
brd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JL11_03460
DNA repair and recombination proteins [BR:
brd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JL11_03460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ALJ07504
UniProt:
A0A0P0CML3
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Position
complement(717815..718612)
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AA seq
265 aa
AA seq
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MTLRLATWNINSIRLRIDQVARFVAERAPDVLMLQEIKCTTDQFPRAAFEEMGLPHMRVA
GQKGWHGVAIASRLPLEDSETFQVCKLGHARCVSARVAGIDVQNFYIPAGGDVPDRTLNP
KFDHKLDFYEQLTEIVARQDRSRPLVMAGDFNIAPGEGDVWNHRYMSKIVSHTPIEVEVL
NRLQATGGFADVLRDRFPEPQKLASWWSYRAADFRKSNRGLRLDHIWTSPGLTPAVIKDT
ARIHDDVREWDRPSDHAPVTVDLSV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacccttcgcctcgccacctggaacatcaactccatccgcctgcgcatcgatcaggtc
gcccggttcgtcgccgaacgggctcccgacgttctgatgctgcaagagatcaaatgcacg
acggatcagttcccgcgcgccgccttcgaagagatgggcctgcctcatatgcgtgtcgcc
ggccagaagggttggcacggggtggcgatcgccagccgcctgccgcttgaggacagcgag
accttccaggtctgcaaactgggccacgcccgttgcgtctcggcccgggtcgccgggatc
gacgttcagaacttctacattcccgccggcggcgacgtgcccgaccggacgctgaacccc
aagttcgatcacaagctcgacttctacgaacagctgaccgagatcgtcgcccgacaggat
cggtctcgccccctggtcatggccggcgatttcaacatcgcaccgggcgagggcgacgtg
tggaaccaccgctacatgtccaagatcgtcagccacacgccgatcgaggtggaggtgctg
aaccgacttcaggccacaggcggcttcgccgacgtgctgcgcgaccgtttccccgaaccg
cagaagctggccagctggtggagttatcgagccgccgacttccgcaagtcgaaccgcggc
ctgcgcctggatcatatctggacctcgcccggcctgaccccggccgtcatcaaggacacg
gcccggattcatgatgacgtccgcgagtgggaccggccgtccgaccatgcgccggtgacg
gtcgatttgtccgtctga
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