Balearica regulorum gibbericeps (East African grey crowned-crane): 104641215
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Entry
104641215 CDS
T09009
Symbol
RC3H2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
breg03000
]
104641215 (RC3H2)
04121 Ubiquitin system [BR:
breg04121
]
104641215 (RC3H2)
Transcription factors [BR:
breg03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104641215 (RC3H2)
Ubiquitin system [BR:
breg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104641215 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104641215
NCBI-ProteinID:
XP_010308084
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKVVPSTNGIANLESGVPQLIPRCADTSLRALENNKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDST
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALATQQKWNSLD
EGSRLTLNLLSKEIDLRNGEVKKGTDYTEDCADTKPDRDIELELSALDTDEPDGQGEQIE
EILDIQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVT
SCFSQPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcatactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtgacactggtgaattgt
cagctggtggaggaagagggtcgggttagagctatgagggcagctcgatcactgggagag
agaaccgttaccgaactgatcttgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgccgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcgagaaaagttctggta
ctttttgttgtacaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcttgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttatgaggctttgcggagagagcat
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcacacatgcaatccattattgacaag
ctccaatctccggaatcttttgcaaagagtgtacaagaattgacgattgtcttgcagcgc
acaggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcgtcaccaacgtgggagcagctggaaaatgcaatggtcgct
gtaaagactgtggtacatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaacagcaaatataaaacaagtatgtgccgagaccttcga
cagcaggggggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaagaaaatcagtgcaacagtgagaacattcccccttcta
aataaagttggcgtaaatagcaccgtctcaaccacaacaggaaacgtaatttctgtcata
ggaagccctgaagcaacagggaaggtggtgccaagtactaatggaatagctaatctagaa
agtggtgttccccaattgatccctcgctgtgcggacacctccttgagagctttggagaac
aacaagaagggagggaagactggagccaatggccagaatgtttctggatcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccgtttgttcccagagtacctgtctaccctccacattctgataatgttcaatatttccaa
gatcccaggactcagttgtcatacgaagttccacaatacccacagacaggatattatcca
ccacctccaacagtaccagctggtgtggctccttgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg
tattactctgtggcatgtcaacctccaaacgaacagaggactgtgcctttaccaagggag
ccgtgtggtcatttgaagaccggttatgatgagcaattaagacggaagccagagcaatgg
gcacagtaccacacgcagaaaactcccctggtatcatcaacccttcctatggcaacacca
tctccaacgccaccttctcctctcttcagcgtagatttcagcacagagttctcagagagt
gtcagtgatttgagcggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgctgtgttaatggatttggacagtggggatgttaaaaggagagtgcat
ttatttgaaactcagagaagggcaaaggaagaagatcctataatcccatttagcgatgga
ccgatcatctccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacgaca
gatcctattcaggccactgcttcccaaggaagtgctactaagcccatcagcgtatcagat
tatgtcccttatgtcaatgctgttgactcaagatggagtgcatatggctcagattctact
tcatcagcacgttatgcggaacgggacagattcatagttacagatttgtctggtcacaga
aagcattccagcactggagatctattgagtattgaattacagcaggccaaaagtaactca
ttattacttcagagagaggcgaatgcactagccacgcaacagaagtggaattctctagat
gaaggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
gtaaagaaagggactgattatactgaagactgtgcagacacaaagccagatcgagacatt
gaattggagctgtcagcccttgatacagatgaacctgatgggcaaggtgaacaaatagaa
gagattctggatatacagctaggtattagttctcaagatgatcagctgctcaatggaaca
actgtagaaaatgggcatccactaaagcagcaccagaaagaatctatggaacagaagaga
caaagtttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaact
tcttgcttcagtcagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagc
acatcagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaa
aatgactttttaaagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
