Balearica regulorum gibbericeps (East African grey crowned-crane): 104642988
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Entry
104642988 CDS
T09009
Symbol
VPS13D
Name
(RefSeq) vacuolar protein sorting-associated protein 13D
KO
K19527
vacuolar protein sorting-associated protein 13D
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
breg04131
]
104642988 (VPS13D)
Membrane trafficking [BR:
breg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104642988 (VPS13D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_DH-like
UBA
VPS13_mid_rpt
Motif
Other DBs
NCBI-GeneID:
104642988
NCBI-ProteinID:
XP_010310453
LinkDB
All DBs
Position
Unknown
AA seq
2449 aa
AA seq
DB search
LNFTFNLYHRYGRPDPLLQRECDIRVTLRMASVQYVHTQRFQAEVVSFIQHFTQLQDVLG
RQRAAIEGQTVRDKAQRASRVLLDIEAGAPVLLIPESSKSNSLIVANLGKLKVKNRFLFA
GMPGTFSLKNKDSVQFSSPLGTPKHNMKKTTSADESKVVMEGLFMKKSSGTNISRLKSEP
MLNTLSKQGQQSKLPIVPSPDSPEDHICLLDCIVVDLQDMNIFAAERYQREYSKAVEDTS
ADLSFPSYFVRQTGGSLLTEPFRLKLQVERNLDKELSHAVADISIHGNLSSVHCSLDLNK
YKLIRGLLENNLGEPIEEFMRPYDLQDPRIHTVLSGEVYTSMSFLIDMVNVSLELMDPKG
KDRCSSLARFDFKKSKLLFESSSNGTKSVNLVSHSMMAFDTRYAGQKSTAGTPNVFNCIF
QSSKNTSSPGAIQIELHFRSTKDSSSFTVVLNNLRVFLIFDWWLLVHDFLYTPGDTKKWE
NRLSSRQHTYSSETTVVPKTVKSGVVTKRSSLHVSTEKQLEVKVNVTGTEFVVVEDMSCF
DTNAIILKGTTVLTYKPKLLDRPFSGSLFGIEVFSCRLGNEQETALSIIDPVQIQMELVG
NASYPSGSGLLDAFNSEDFPPILEIQLQALDIRLSYNDVRLFLAIAKSVPQQTSAAMPDS
TVSIAENTVNPSSLALVNETSPLTHENRVPSKRVLDPVLEVQLARLQELGFSMEDCRKAL
LICQGDLKKAASWLFKNAEPLKSVSLTSSGRDSQGIVPFQFISGVEIKAESICICFIDDC
MDCDVPLAELNFSCLNFLQHLRANPEGYAHFTLSGDYYNRELSGWEPFIEPWPCSVSWQQ
QASSRLHPSRLKLEVKAENRLDINITSVFMEQYTCTKQSWMEDYCKQDKELNVISSEDWM
GSSVDPPCFGQSLPLVYLRTRSTASLTNLEHQIYARAEMKTPKRRQPFVPFALRNHTGCT
LWFATLTTTPTRAALSHSGSPGVVPEENGTLLDDAHNVSEWQEVITGEEIPFEFEARGKL
RHRHTHDLRIHQLQVRVNGWEEVSPVSVDKVGTFFRYAAPDKNSSSSTLGSPISRTNIIH
PQVYFSSLPPVCVVFEVTMEGSARKVITVRSALIVKNKLETPMELRLDSPSAPDKPVVLP
AVMPGDSFAIPLHLTSWRLQARPKGMGVFFCKAPIHWTNVQKTAEVCSSKRECHSMESEN
SRFFRFCVAIKKENYPDYVPSNIFSDSAKQIFRQPGHTIYLLPTVVICNLLPCELEFYVK
GMPINGTLKPGKEVALHTADTSQNIELGVLLENFPICKELLIPPGTQNYMVRMRLYDVNK
RLLNLTIRIVCRAEGSLKILISAPYWLINKTGLPLIFRQDNAKTDAAGQFEEHELARSLS
PLLFCYADKEQPNFCTMRVGKGIHPEGMPGWCQGFSLDGGSGVRALKVIQHGNRPGLIYN
IGIDVKKGRGRYIDTCMVTFAPRYLLDNKSTYKLAFVQREFARGRGTSNPDGYISTLPGS
SVVFHWPRNDYDQLLCVRLMDVPNCIWSGGFEVNKNNSFHINMRDTLGKCYFLRVEITLQ
GATYRIAFSDTDQLPPPFRIDNFSKVPIVFNQHGVVEPRLYTEVKPLTSLDYAWDEPILP
PFIMLTVKGAGSSEIICSMNDFQDSKQLYYENFIYIAATYTFSGLQEPSVRPVASNKNAA
YAELVLDVSPKTQRVVLKKKEPGKRSQLWRMMGTGMLCHEGSSVPHNPHKPSPRPVDSCM
ILDIAGLAAVTDNRYEPLMLRKPDRRRSTTQTWSFRDGKLTCGIHGLVVQAKGGILGLHD
GAEVVLGPDTSLELLGPVPPEQQFINQKMRPGSGVLAVRVIPDGPTRVLQIMDFNQRRND
RLSSEGDELPVTEQDLRKLKNPDTEQELEVLVKLEGGIGLSLVNKVPEELVFASLTRINV
HYTQLSTSQVLELSVQDIQVDNQLIGTTQPFMLFLTPKMSENEPVETGPAVQVNAMKFPS
KNALTDIYKHLMITARKFTVQIEEKLLLKLLSFFGYDQSESEVEKYDENLHEKVVEQSGG
QKRYYFENLKISVPQIKLSVFTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPY
ETREFIINDILKHFQEELLSQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIR
NVTHGVSNSAAKFAGTLSDGLGKTMDNRHQTEREYIRYHAATSGEHLVAGIHGLAHGIIG
GLTSVITSTVEGVKTEGGVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSG
PRTQAERVRKPRCCRGPQGLLPRYLESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLI
SSKAVYFLKSGDYTDREAIFLEVKYDDLYHCLVSKDHRNVYIQLTKKAVNTSSGVAMPGP
SQKKPMVKVKSEALAVKLSQEINYAKSLYYEQQLMLRLSENQEQLELDS
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
ctaaattttactttcaacctttatcatagatatgggcggccagatccgctgctacagagg
gagtgtgatattcgtgtcactctgcgaatggcatctgttcagtatgtgcatactcagcgt
ttccaggcagaggtggtgtctttcatccaacattttactcagcttcaggatgtcttaggg
cggcagagagcagcaattgaaggacaaacagtaagagataaagcacagcgagcttcccga
gttcttcttgatattgaggctggtgctcctgttctgcttatacctgaaagctcgaagtct
aatagtcttattgtggctaatcttggaaaactgaaagtcaagaacagatttttgtttgcg
ggtatgccgggtactttttcactaaagaacaaggattcagttcaattttcatctcctttg
ggaaccccgaaacataacatgaagaaaacaacaagtgctgatgaatcaaaagtagtgatg
gaaggattgttcatgaaaaaatcatcaggaacaaacatttctaggctgaagagtgagcct
atgctgaatactttgagtaaacaaggacaacaatcaaagctacctattgtaccaagccct
gacagcccagaggatcacatctgcctcttagactgcattgtggttgatctccaggacatg
aacatatttgctgcggaaagataccagagagaatattcaaaggctgtggaagatacaagt
gcggacttgagctttccatcctacttcgtgaggcagacaggaggaagcctattaacagaa
cctttcagactgaagttacaagtagagagaaacttagacaaagagctaagtcatgcagtt
gcagacatatcgatacatggcaatctgtcatcagtccattgctctctggatttgaataag
tataaactgatacgtggactgctggagaacaaccttggggagcctatagaagagttcatg
cggccttatgatttgcaggatccaagaattcatacagttttgagtggagaagtgtatacg
tctatgtcgttcctcattgacatggttaatgtgagtctggagctcatggatccaaaagga
aaagatcgatgcagctctttagccaggtttgattttaagaaatccaagttgctttttgag
agctcttcaaatggaacaaagtctgtaaatttggtttctcattccatgatggcatttgac
acacgttatgctggacagaagtctactgcaggcacgccgaatgtgttcaattgcatcttt
cagtcgtcaaagaatactagtagtccaggagcaatccagattgaattgcatttcaggtct
actaaggattcctccagtttcacagttgttctgaacaatcttcgtgtatttctaatattt
gactggtggttacttgttcatgactttttatatactcctggagataccaaaaagtgggaa
aatcgcctttcttcccggcaacacacttacagcagtgaaacaactgtagttccaaaaaca
gtgaaaagtggagtagttacaaaacgttcatcgctacatgtatctacagaaaaacaactg
gaagttaaggttaatgtgacaggaactgaatttgtggtcgttgaagacatgtcttgtttt
gataccaatgcaattattttgaaggggactactgttctcacttacaagcccaagttgtta
gatcgtcccttctctggtagtttgtttggcattgaggttttttcatgccggttaggaaat
gagcaagagactgcactgtcaattattgatccagtacaaattcagatggaactcgttggg
aatgcttcctacccaagtggttcaggactgttggatgctttcaatagtgaggattttcct
cctattctagagattcagttgcaagcactggatatcagactgtcctacaatgatgttcgg
ctgttcttggcaattgcaaagtcagttcctcaacagactagtgcagctatgcctgactca
actgtatcgattgctgaaaatactgttaatccttctagtttagcactggtgaatgagact
tctcccttgacacatgaaaacagagtgccatccaaacgtgtgttggatcctgttcttgag
gtacagctggctcgcctccaagaattgggattcagtatggaagattgtcgtaaagctctt
ttgatctgccaaggtgacttgaaaaaagcagcaagttggttatttaagaatgctgaacct
ttgaaatcagtttccctgacctcttctggtcgagatagccaggggattgtgccttttcag
ttcatctctggagtggaaataaaagcagaaagtatatgcatttgctttattgatgactgc
atggactgtgatgttccccttgctgagttaaacttttcatgtttgaattttctccagcat
ttgagagccaaccctgaaggctatgctcattttaccctctctggagattattacaatcgt
gagctatcaggctgggagccattcattgagccatggccgtgttcagtttcttggcagcaa
caagcttcgagccgcctccacccttcgcgactgaagctggaagtaaaggctgaaaaccgt
ttggatataaacattacctctgtcttcatggaacaatacacatgtaccaagcagtcatgg
atggaagattactgtaaacaggacaaagaattgaatgtaatcagttcagaagactggatg
ggctcttcggtggatccgccgtgttttgggcagagccttcctcttgtctaccttagaact
aggagtacagccagtttgactaacctagagcatcaaatctatgctagagctgaaatgaag
actccaaaacgtagacagccatttgtcccatttgctctaagaaatcatactggatgcact
ctgtggtttgctaccctaactacaacacctacacgggctgcgctgtctcacagtgggagt
ccgggtgttgttcctgaggaaaacgggacattgctggatgatgcccataatgtcagtgaa
tggcaagaagttatcacaggggaggaaattccctttgaatttgaagccagagggaaactc
agacacaggcacacacatgatctaagaattcatcaattgcaagtgagagtaaatggctgg
gaagaagtcagtccggtatctgtagacaaagttggaacatttttccgatatgctgcacca
gataagaactcatcctcttctactcttggaagcccaataagtagaacaaatataatacat
ccacaagtctacttttcttcattgcctccagtttgtgtggtatttgaagttaccatggaa
ggtagtgctcggaaagtgatcacagtgcgctcagccttgattgtgaagaacaagctggaa
acaccaatggaactaagactagacagtccttctgctccagacaaacctgtagttcttcca
gcagttatgccaggagattcctttgctattccattacaccttacatcttggcgtttgcaa
gccaggcccaaaggaatgggagtctttttctgtaaggctccaattcattggactaatgtt
cagaagacagcagaagtatgtagcagcaagcgagagtgtcattcaatggagtctgaaaac
agcagatttttcaggttttgtgtggctatcaagaaagaaaattatccagattacgtgcct
tccaacatattttctgacagtgctaaacagattttcagacagcctgggcatactatttat
ctcttgccaacagtggtaatctgtaacttgctaccttgtgaactcgagttctatgttaaa
ggaatgccaattaatgggactttaaaacctggcaaagaggtagcgttgcacacagcggat
acatctcagaacattgagcttggggtattactagaaaacttcccaatctgcaaagagctg
ttgattcctcctgggacacaaaactatatggtgcggatgcgattgtatgatgtcaacaaa
cgactgctaaatttaaccataaggattgtgtgtcgtgctgaaggttctctaaaaatacta
atttcggcaccatattggttaatcaacaaaacaggattaccacttatcttcagacaagat
aatgcgaaaacagatgctgcaggtcaatttgaagagcacgagcttgctagaagcctcagc
ccacttctgttctgttacgctgataaagaacagccaaacttttgtacaatgcgggttgga
aaagggattcatcctgaaggtatgcctggctggtgccagggtttctccctggatggtggt
agtggtgtcagagcccttaaagtgatccaacatggaaacagaccaggcctcatttataac
attggtattgatgttaaaaaaggcagaggccgttatattgatacatgcatggtaacattt
gcaccccgttacctattagataacaaatcaacctacaagcttgcctttgttcagcgggaa
tttgccagaggtcggggaacatccaatcctgacggctatatctccacacttcctggttcc
agtgtcgtgttccactggccacgtaatgattatgatcaactattgtgcgtgagactaatg
gatgtcccaaactgcatttggtccgggggctttgaggtcaacaaaaataactcgttccat
attaatatgagggacaccttgggaaaatgttacttcttaagagtagaaattactcttcag
ggagccacataccgcattgcattcagtgacactgatcagttacctccacctttccgcata
gacaatttttccaaggtcccaattgtttttaatcagcacggtgttgtcgagccaagactg
tacactgaagtgaagcccctgacctctctggattatgcgtgggatgaacctattctacct
ccttttataatgctcacagttaaaggggcaggctcctcagaaatcatctgtagcatgaat
gacttccaagatagcaagcagctttactatgaaaacttcatttatattgctgctacatat
actttctcaggtttacaggagccaagtgtaagaccagttgcttcaaataagaatgctgca
tatgcagagcttgtccttgatgtttctccaaagactcagcgagttgtgctgaaaaagaag
gagccaggaaaacgatcccagctttggagaatgatgggcacaggaatgctttgccatgaa
ggttcttcagttcctcataacccccataaaccttctcctcggcctgtggactcttgcatg
attttagatattgcaggtctggcagctgtcacagataacaggtatgagcccctgatgttg
agaaagcctgatcggcggcgcagtactacccagacatggagttttcgtgatggaaagttg
acctgtggtattcatggacttgttgttcaggcaaagggaggaatactaggtcttcatgat
ggagcagaagttgttcttggtcctgatacttcacttgaacttttggggccagttccacct
gaacagcagttcataaaccagaagatgagacctgggtcaggagtactagctgttagagtc
atcccagatgggccaactagagttctgcagataatggattttaaccaacgtagaaatgat
cgtttatccagtgaaggagatgaacttccagttacagagcaagatctacgcaagttaaaa
aatccagatacagagcaggaattagaagtgcttgtgaaactggagggtggaataggattg
tctttggtcaataaagttcctgaagagttagtatttgcaagcctcaccagaattaacgtc
cactacacacaactgtcaacaagtcaggtgctagagctcagtgtgcaagacatacaggtg
gacaaccagcttattggcaccacacagccttttatgctcttcctgacacccaagatgagt
gaaaatgaacccgtggagactggtcctgcagtgcaagtaaatgcaatgaaatttcccagt
aaaaatgcactgactgatatatacaagcatctgatgatcactgctcgaaagttcacagtt
caaattgaggagaaactacttctgaagctgttgagtttctttggctatgatcagtctgaa
tcagaggttgaaaagtatgatgaaaacctccatgaaaaggttgttgaacaaagtggagga
caaaagcgatactactttgaaaatctgaaaattagcgtgccacagataaagttgagtgtc
ttcacttccaacaagctacctttggatctcaaggcattgaagagcacactgggatttcct
ctaatccgatttgaagatgctgtgattaatctggatcctttcactagggtccatccatat
gaaactcgggagtttatcattaatgacattctgaaacactttcaagaggagctgcttagt
caggcagcaaggattctaggttctgtggattttcttggcaaccctatgggtctactgaat
gatgtttcagaaggtgttactggacttataaaatatggcaatgttggtggtctcataaga
aatgtcacacatggagtatcgaactctgctgcaaagtttgctgggaccttgtcggatggt
ttgggaaagacaatggataacagacaccagaccgaacgagaatacattcgatatcatgct
gcaactagtggagaacatcttgtagctggaatccatggacttgcacatggtatcattgga
ggattgacaagtgtaataacttcaacagtcgaaggtgtgaaaactgaaggaggtgtcagt
ggtttcatatcgggccttgggaaagggctggttggcacagtaaccaaacctgtggctgga
gctctggatttcgcatcggaaactgcacaggcagtgagggacactgcaactctaagtggc
cccaggacacaagcggagagagtgagaaagccacgctgctgcagaggacctcaagggctc
ttgccccgctatttagaaagtcaagcagagggacaagaacagctgttcaaactgactgac
aacatccaagatgagttcttcatagcagtggagaacatagacagctattgtgttctcatt
tcgtctaaagctgtttatttcctcaagagtggtgattacacagaccgcgaggccatcttc
ctagaagtcaagtacgatgatctctaccactgccttgtttcaaaagaccacaggaacgtg
tatatacagctgacaaagaaagctgttaatacaagtagtggtgtagcaatgccaggccca
tcacagaaaaaaccaatggtgaaagtgaaatctgaagctcttgcagtgaagctatctcaa
gaaataaactacgcaaagagcctttattatgaacaacagcttatgttaagactcagtgaa
aatcaagaacaactagagctggactcttga
DBGET
integrated database retrieval system
