Mycetohabitans rhizoxinica: RBRH_03918
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Entry
RBRH_03918 CDS
T01355
Name
(GenBank) Deoxyribodipyrimidine photolyase (EC 4.1.99.3)
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
brh
Mycetohabitans rhizoxinica
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brh03400
]
RBRH_03918
Enzymes [BR:
brh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RBRH_03918
DNA repair and recombination proteins [BR:
brh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RBRH_03918
Prokaryotic type
RBRH_03918
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CBW75389
UniProt:
E5AS07
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All DBs
Position
1775586..1777154
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AA seq
522 aa
AA seq
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MSRPPLYDFSMPPSSPPCSLPPVVVWFRDDQRLADNPALEYATATGHPVVCVYVHDPAPR
NTRPPGAAGRWWLHESLRALNAALVALGGELTVLHGSESQAIEAFAVAIGAIKVCWNRRY
SAPQRETDTAIKTALKERGIAVFTFNGHLLREPWAVATRDGRPFQVFSAYWRAARHQYSP
EAPQPAPQRINFFPVPDNIGVAARVENLSALALQPRTPDWASGLRETWQCGEQAGQTQLD
AFLANALTRYASGRDVPAMQATSRLSPYLRFGNLSARQVWHAALSAARVGRHCGDARRTC
TASSGVDKFLDELGWREFSYYLLYHCAPLHQVNFKRQFDTMPWRADTADLRAWQHGRTGY
PLVDAGMRELWHTGWMHNRVRMVTASFLVKHLLINWREGEAWFWDTLVDADEASNPANWQ
WVAGSGADAAPYFRIFNPVLQGQKFDPQGAYVRRWVPELARVPSGCVHAPWLAQPAQLAS
ASVRLGQDYPLPVVPHQQARERALKAMEHMRGRESGSADPLA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacggcctccgctttacgacttctcaatgccgccgtcttcgccaccctgctcgcta
ccacccgtcgtcgtgtggtttcgcgacgatcaacgcctagccgacaatcccgcgctcgaa
tacgccactgccacgggtcaccctgtcgtgtgcgtgtatgttcacgacccggcgccacgc
aatacgcgcccgccgggcgcagctgggcgctggtggctccatgaatccttacgcgcactc
aatgctgcgctcgtagcgctgggcggtgaattgaccgtccttcacggctccgagtcgcag
gccatcgaagcgttcgccgtggcaatcggcgcgatcaaggtgtgctggaatcgccggtat
tcggcaccgcaacgcgaaaccgacaccgcgatcaagacggcgctcaaagaacgtggcatt
gcggttttcacttttaatggccacttgctgcgagagccgtgggccgtggccacgcgagat
ggccgtccgtttcaggtcttcagcgcgtactggcgcgccgcgcgccaccagtattcccct
gaagcaccgcagcccgcacctcagcggatcaacttctttcccgtgccggacaacatcggc
gtggcggcgcgcgtggaaaatctgtctgcactggcgctccagcctcgcacccccgactgg
gccagcgggctgcgcgaaacgtggcaatgcggcgaacaagcgggacagacgcaactggac
gctttcctcgcgaatgcgctgacccgttacgcgagtggacgcgacgttcccgcgatgcag
gcaaccagtcggctctctccgtatcttcgcttcggcaatctctcggcacggcaagtatgg
catgcagcactgtctgctgcgcgcgtcgggcgccactgcggcgacgcgcgccgcacgtgc
accgcgagcagcggcgtcgataagtttctcgatgagctgggctggcgcgagttctcatac
tatctgctctatcattgtgcaccgctgcatcaagtcaacttcaaacggcaattcgacacg
atgccgtggcgtgccgataccgcggatctgcgcgcgtggcagcatggccgcaccggctat
ccgctcgttgacgccggcatgcgcgagctatggcacacaggttggatgcacaatcgcgtg
cgtatggtaacggcgtcgtttctcgtcaagcatctgctcatcaactggcgcgaaggagag
gcttggttctgggacacgctcgtcgatgccgacgaagccagcaatcctgcgaactggcaa
tgggtggccggcagtggcgcggacgcggcgccgtactttcgcattttcaatccagtgcta
cagggtcagaaatttgacccgcagggcgcctatgtgcggcgctgggtgcccgaactcgcg
cgcgtgccgagtggatgcgtccatgcgccatggctcgcgcaacccgcacaactggcgtct
gcgtcggttcggctgggtcaggactatccgctgccggtggtgcctcaccagcaagcacgc
gagcgggcgctgaaggcgatggagcacatgcgtgggcgcgaatcgggcagcgccgacccg
ttggcatga
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