Buceros rhinoceros silvestris (rhinoceros hornbill): 104487853
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Entry
104487853 CDS
T08612
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03013
Nucleocytoplasmic transport
brhi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104487853 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
104487853 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brhi03019
]
104487853 (THOC1)
03041 Spliceosome [BR:
brhi03041
]
104487853 (THOC1)
Messenger RNA biogenesis [BR:
brhi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104487853 (THOC1)
Spliceosome [BR:
brhi03041
]
Complex C
Other components
EJC/TREX
104487853 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104487853 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
104487853
NCBI-ProteinID:
XP_010143328
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MSTREALNNKSIKPLLNTFNQIPGSENEKKCTLDQAFRVIVEEEIINKAQCENLLAIISL
AINGVTEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVATWKSNMFYSAGKNYLLR
MCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEHESTL
GQKHTEEREEGMDVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQDYFRNPVQCYEKVSWK
TFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFR
RHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKAVYQLLSENPPDGERFSKMV
EHILNTEENWNSWKNEGCPSFVKERPPDSKPMRPVRKRPAPEDFLGKGPNKKILMGNEEL
TRLWNLCPDNMEACKSENREYMPTLEEFFEEAIEQADPENMVENKYKAVNNSNYGWRALR
LLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKEN
NESPEVQRDKAMTSDQIESFANRLGEQWKALAPYLEMKDSDIWQIESDSEDVKMRAKQLL
VAWQDQEGTHATPENLITALNKAGLSDLVESLTSDTEGSS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccagagaggctctgaataacaaaagtatcaagccattgttgaacacatttaac
cagattcctgggagtgaaaatgaaaagaagtgtaccttggatcaagcttttagagttatt
gtagaagaagaaataataaacaaagctcagtgtgaaaatctcctggcaattatttctctt
gctattaatggagtcacagaaggtatctgcactgcatcaaccccttttgtgcttctgggg
gatgttctggattgcctgcctttggatcagtgtgacaaaattttcacttttgtagagaaa
aatgttgctacgtggaaatcaaatatgttttactccgcagggaaaaactacttgctacga
atgtgcaatgacctcctaagaagattatctaagtcacaaaacacagtcttctgtggaaga
attcagctgttcttggctaggttatttccgctttcagaaaagtcaggacttaacttgcag
agtcagtttaacctggaaaatgtcactgttttcaataccaatgaacatgagagcactcta
ggacagaagcacactgaggaaagagaagaaggaatggatgtagaagaaggtgaaatggga
gatgatgaagcaccaacaagttgttccattccaatagattataacctgtatagaaaattc
tggtcacttcaagattattttagaaatcctgtgcagtgctatgagaaggtctcgtggaaa
acttttcttaagtactcagaagaagttttggctgttttcaaaagttataaattagatgac
actcaggcttcccgaaagaagttggaagaactaaaaacaggaggagaacatgtatatttt
gcaaaattcctaactagtgaaaagctgatggatttacagctgagtgacagtaactttcgc
cgtcacatcttgttgcagtacctaatactatttcagtatctaaagggacaggtcaaattt
aaaagttcaaactatgttttaacagatgaacagtctctttggattgaagatactacaaaa
gcagtttatcagcttctttcagaaaatcctccagatggagaaagattctcaaaaatggta
gagcatatattaaatactgaagaaaactggaactcatggaaaaatgagggctgcccgagc
tttgtgaaagaaagacctcctgattctaagccaatgaggcctgtgagaaagaggccagct
ccagaggacttcttaggaaaaggaccaaacaaaaaaatccttatggggaatgaggaactg
acccgcctttggaatttatgtcctgataacatggaagcttgtaagtctgagaatagggaa
tatatgccaacgttggaagaattttttgaagaagctattgaacaagcagaccctgaaaac
atggttgaaaataagtataaggctgtgaacaattcaaactatggctggagagcattgaga
cttctagcacgccgaagtccccacttcttccagccaacaaaccaacaattcaagagttta
cctgaatatctagaaaacatggtaatcaaattagccaaggaactgcctcctccttctgaa
gaaataaaaacaggagaggatgaagatgaggaagataatgatgctttattaaaggaaaac
aatgaaagcccagaggtacaacgggacaaagccatgaccagtgaccaaatagaatcattt
gctaacaggcttggggagcaatggaaggccttggccccctacttggaaatgaaagattct
gatatatggcagatcgagtcggacagtgaggatgtgaagatgagagctaagcagctgctg
gttgcctggcaggatcaggagggcacacatgcaacccccgagaatctgataactgcgctc
aacaaagccgggttaagtgaccttgtagaaagcctaaccagtgacactgaaggtagcagc
taa
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