Buceros rhinoceros silvestris (rhinoceros hornbill): 104488340
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Entry
104488340 CDS
T08612
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03013
Nucleocytoplasmic transport
brhi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104488340 (UPF3B)
03015 mRNA surveillance pathway
104488340 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brhi03019
]
104488340 (UPF3B)
Messenger RNA biogenesis [BR:
brhi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104488340 (UPF3B)
mRNA cycle factors
P-body specific factors
104488340 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104488340
NCBI-ProteinID:
XP_010129655
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
LYPHMFSRAYINFKNQEDIVLFRDRFDGYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKD
AKTGTIEDDPEYKKFLESYSADDEKLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQ
RLREEKREERRRRELERKRQREEERRKWKEEERRKRKEAEKMKKVDRCPEKERDRSKEEP
KIKLLKKPEKDEKDLEKKEKSKKLEKETLREEKNASSTSAKRSDGETKEEKAKKSEDECV
KDYRDRDRDFERDREYERAQREKLRRQEEERRRQKERFEKEKVFRRKEEEVKKERDLPRE
KGKKSDLTDFTSSMDKSEKVTKDDKKEDTIKRDRIRNKDRPAMQLYQPGARSRSRLCQYE
EGAAKPTDQGAEKRPESETTNTKEEE
NT seq
1162 nt
NT seq
+upstream
nt +downstream
nt
cttgtaccctcacatgttctcgagagcctacatcaactttaaaaaccaggaagacatcgt
cctcttcagggatcgctttgacggctatgtctttgtcgatcacaaaggccaggaatatgc
tgccatagttgagtttgcacctttccagaaagctgcaaaaaagaagagtaagaaaaagga
tgccaaaactggaactatcgaagacgatccagagtacaagaagtttttggaaagttacag
tgcagatgatgaaaaattaacctccacccctgaaactttgttggaggagatagaggcgag
aaacaaagagctcatagctaaaaagactactcctttattgaacttcttgaaaaataaaca
gagactgagagaagaaaaaagagaggagaggaggaggagagaattggaaagaaaaagaca
aagagaagaagaaagaagaaaatggaaagaggaggagagaaggaagagaaaagaagcaga
aaaaatgaagaaggtagacagatgccctgaaaaagaaagagacagatcaaaagaagaacc
aaagattaagctacttaagaagcctgaaaaagatgagaaagacttggagaaaaaagaaaa
atccaagaaactggaaaaagagactctgagggaggaaaaaaatgcgagtagtacatctgc
caaacgatctgatggggagacaaaagaagagaaggcaaaaaaatcagaagatgagtgtgt
aaaggactacagggaccgagatagagattttgaaagagacagagaatatgagagagcaca
gagggagaaactgaggcgccaagaagaggagcgtcggaggcagaaagagcgctttgagaa
agagaaggtttttagaagaaaagaggaagaggtgaaaaaggagagagacttacccagaga
aaagggaaagaaaagtgatcttacagactttaccagcagcatggacaaatctgagaaagt
aaccaaagatgataaaaaagaggataccattaagagggatcgtatcagaaacaaggatcg
tccagcaatgcagctgtaccagccaggagcccggagccgaagcaggttgtgtcagtatga
agagggtgctgcaaagcccacagatcagggggcggagaagagaccagagagtgagaccac
gaatacgaaggaagaggagtga
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