Buceros rhinoceros silvestris (rhinoceros hornbill): 104500706
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Entry
104500706 CDS
T08612
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03013
Nucleocytoplasmic transport
brhi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104500706 (UPF3A)
03015 mRNA surveillance pathway
104500706 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brhi03019
]
104500706 (UPF3A)
Messenger RNA biogenesis [BR:
brhi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104500706 (UPF3A)
mRNA cycle factors
P-body specific factors
104500706 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104500706
NCBI-ProteinID:
XP_010142700
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
IVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLFRD
RFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCADEE
KICANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRL
REEEKRKRREEERRKRKEVEKQKKISDKEIRIKLLKKPEKGDELASEKYKEKGEEADIEE
NKWDRSPGSGSIKSKSLEGSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDGRK
HRAHYEFDKFVRRNEEELKWGKGYNQDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASKKE
RIRNKDRPAMQLYQPGARIRTHTGSTSKTFDCSGKPFEEALDRKYEVDNSAGGGSEKSEE
AE
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atagttattcgacggcttcctccttgtctaactaaggagcaactggaagagcagctacat
cctctacctgcccatgattattttgagttttgcactgctgatcccagcctttatcctcat
ctctactcaagagcatacattaactttagaaatcctgaggacatccttctttttagagat
cgctttgatggctatgtcttcattgataataaaggtttggagtatcctgcagtggttgaa
tttgctccattccagaagatttcaaaaaagaagctgaagaagaaggatgccaaagctggg
agcattgaagacgatccagaatataggaaatttttagagagttattgtgctgatgaagag
aaaatctgtgctaatcctgagattcttttgggagagattgaggccaaaacaagggaactc
attgctagaagaacaacaccccttttggaatatattaaaaatagaaaattagaaaagcag
agaatacgagaagagaaaagagaagaacgaaggcggagagaattggagaaaaaacgtcta
cgagaggaagagaaaagaaagcgcagagaggaagaaagacgtaaaagaaaggaagtggag
aagcagaagaaaatttctgataaagaaataaggatcaagctactcaagaagcctgaaaaa
ggagatgaactggccagtgaaaagtacaaagaaaaaggtgaagaagctgacattgaggaa
aacaaatgggatagatcacctggatctgggagtataaaatccaaatctttggagggctca
cttaaagaacttaaggaaaagtcacaaaatgatagtgacaaagagcaaagagatttggag
agaagatttcgagaaaaagaacctgaaagacaaaggtatcgattggatgatggcagaaag
catagagctcactatgagtttgacaagtttgtgagaaggaatgaagaagagctgaaatgg
gggaaaggatacaaccaagacagaggaaagaaagggaactacaactacagcttcactgtg
gaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaaaaggag
cgcataagaaataaggatcgcccagccatgcagttataccagccaggagctcgcattcga
acacatacgggatctacaagtaaaacctttgactgcagtgggaaaccctttgaagaggct
cttgatagaaagtatgaagtggataattcagctggaggtggttctgagaagagtgaagaa
gcagagtaa
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