Brevibacterium sp. CS2: FDF13_12565
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Entry
FDF13_12565 CDS
T05958
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bri
Brevibacterium sp. CS2
Pathway
bri03030
DNA replication
bri03430
Mismatch repair
bri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FDF13_12565 (dnaE)
03430 Mismatch repair
FDF13_12565 (dnaE)
03440 Homologous recombination
FDF13_12565 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bri03032
]
FDF13_12565 (dnaE)
03400 DNA repair and recombination proteins [BR:
bri03400
]
FDF13_12565 (dnaE)
Enzymes [BR:
bri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FDF13_12565 (dnaE)
DNA replication proteins [BR:
bri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FDF13_12565 (dnaE)
DNA repair and recombination proteins [BR:
bri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FDF13_12565 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QCP06015
UniProt:
A0A4P8HCF1
LinkDB
All DBs
Position
complement(2789804..2793385)
Genome browser
AA seq
1193 aa
AA seq
DB search
MSSDSFVHLHVHTEYSMLDGAARVGDLMAATKEMGMPAIATTDHGYLFGAFDFWSQATSA
GVKPIIGVEAYVTPGTSRGDKTRVKWRTDESQRGDDVSGGGAYTHMTLLAENNTGMQNLF
RASSVASLDSAFGKWPRLDRELIENHASGLIATTGCPSSEVQTRLRLGQYDEALRAASEY
KDIFGAGNYYCEIMDHGLSIERRVIKDLLRLAKELDLPLVATNDLHYTHESDAKAHEALL
AIQSGSKLIEPTYDQGGSRFAFSGSGYYLKSPAEMRALFKEMPEACDNTLEIAERCAVSF
DTSANYMPKFPCPPGEDETSWLIKEVDKGLHYRYPGGIPDEVRKQADYELEVIISMGFPG
YFLVVADFINWSKDNGIRVGPGRGSGAGSMVAYAMRITDLDPLEHGLIFERFLNPERVSM
PDFDVDFDDRRRGEVIEYVTRKYGSEYVAMIVTYGTIKTKQALKDSARVLGKPFSLGERL
TKALPPPVMAKDIPLADIEDPQAKRYGEAGEFREFVASDPDAQETFATAKGLEGLKRQWG
VHAAGVIMSSEPIIDVIPIMRRFQDGQVITQFDYPTSEGLGLIKMDFLGLRNLTIISDAI
ANIELNRDFHLDLEQLALDDAESYKLLARGDTLGVFQLDGAGLQGLLRLMQPDNFEDISA
TLALYRPGPMGAQSHTNYALRKNDQQPITPIHPELEEPLRDILDTTYGLIIYQEQVMAIA
QKVAGYSLGQADILRRAMGKKKKSELDKQQVGFFEGMKERGFSEAAAQALWDILLPFSDY
AFNKAHSAAYGVISYWTAYLKAHYPAEYMAALLTSVGDNKDKLAIYLGECRRMRITVLPP
DVNESAQNFTPVGTDIRFGMGAVRNVGANVVDGIVEARQDKGAFTSFTDFLDKVPSHVCN
KRTIESLIKSGAFDSLGHTRRSLVEVHEEAVDSVIGVKRQEAAGQFDLFAGLGGDDASET
SFSVSIPDRPEWEKKEKLAFEREMIGLYVSDHPLNGLEGVLQSEAEASIAEIVDPENTRP
EGSSVKVCGMITQVQRRVSKNSGKPYGIVTVEDLEASVEVMFFGDVYEPVATLLATDLVV
TVTGRIRRSDDRPASLMAQSMTIPDVTDPADRPLHITMPVQRCTPELVEQLGEILRANSG
PTEVRLSLTQPGRSIVMKLDASVRVTPGPSLFGDLKALLGAQCLQVSSPSMFG
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcgacagcttcgtacatctgcacgtgcacaccgagtactcgatgctcgacgga
gcggcccgcgtgggcgatctcatggcggcgaccaaggagatggggatgcccgccatcgcc
accaccgaccacgggtacctgttcggcgcgttcgacttctggagccaggcgacgagcgcc
ggggtcaagccgatcatcggcgtcgaggcctacgtcacccccgggacgtcacgcggggac
aagacccgcgtcaagtggcggaccgacgagagccagcgcggcgacgacgtgtccggcggc
ggcgcctacacccacatgacgttgctggcggagaacaacaccggcatgcagaacctgttc
cgggcgtcctcggtggcctcgctcgactccgcgttcggcaagtggccccgcctcgaccgg
gagctcatcgagaaccacgcgagcggcctcatcgccaccaccgggtgcccctcgagcgag
gtgcagacgcgcctgcgcctgggccagtacgacgaggcgctgcgcgcggcctcggagtac
aaggacatcttcggcgccggcaattactactgcgagatcatggaccacgggctgtccatc
gagcgccgggtcatcaaggacctgctgcggctggcgaaggagctcgatctcccgctcgtc
gcgacgaacgacctccactacacgcacgaatcggatgcgaaggcgcacgaggcgctgctc
gcgatccagtccggctccaagctcatcgagccgacctacgaccagggcggcagccgcttc
gcgttctccggatccggctactacctcaagtcgccggcggagatgcgcgccctgttcaag
gagatgcccgaggcctgcgacaacaccctcgagatcgccgagcgctgcgcggtgtccttt
gacacctcggcgaactacatgccgaagttcccctgcccgccgggcgaggacgagacctcc
tggctcatcaaggaggtcgacaagggcctccactaccggtatcccggcgggatccccgac
gaggtgcgcaaacaggcggactacgagctcgaggtcatcatctcgatgggcttccccggc
tacttcctcgtcgtcgccgacttcatcaactggtcgaaggacaacggcatccgggtgggc
ccgggccgcggctccggcgccggctcgatggtcgcctacgcgatgcgcatcaccgacctc
gacccgctcgagcacggcctgatcttcgagcgcttcctcaatcccgagcgcgtctccatg
cccgacttcgacgtcgacttcgatgatcgtcgccgcggcgaggtcatcgagtacgtcacc
cgcaagtacggcagcgagtacgtcgcgatgatcgtgacctacggcacgatcaagaccaag
caggcgctcaaggactccgcgcgcgtgctcggcaagccgttctcgctgggggagcggctc
accaaggcgctgccgccgccggtcatggccaaggacatcccgctggccgacatcgaggac
ccgcaggccaagcgctacggcgaggccggggagttccgcgagttcgtcgcctccgacccg
gacgcgcaggagaccttcgccaccgccaagggactcgaggggctcaagcggcagtggggc
gtgcacgccgcgggcgtcatcatgtcctcggagccgatcatcgacgtgatcccgatcatg
cgccgcttccaggacggccaggtcatcacccagttcgactaccccacgagcgagggcctg
gggctcatcaagatggacttcctgggcctgcgcaacctcacgatcatctccgacgcgatc
gcgaacatcgagctcaaccgcgacttccacctcgacctcgagcagctcgcgctcgacgac
gcggagtcctacaagctgctggcccgcggcgacacgctcggggtgttccagcttgacggc
gccggcctgcaggggctgctgcgcctcatgcagccggacaacttcgaggacatctccgcg
accctcgcgctctaccggcccggcccgatgggcgcccagtcgcacacgaactacgcactg
cgcaagaacgaccagcagccgatcacgcccatccaccccgagctcgaggagccgctgcgc
gacatcctcgacacgacctacggcctcatcatctaccaggagcaggtgatggcgatcgcg
cagaaggtcgcgggatactcgctcggccaggccgacatcctgcgccgcgcgatgggcaag
aagaagaagtccgagctcgacaagcagcaggtcggcttcttcgaggggatgaaggagcgc
ggcttctccgaggccgcggcgcaggcgctgtgggacatcctgctgccgttctccgactac
gcgttcaacaaggcccactccgcggcctacggcgtgatctcctactggaccgcctacctc
aaggcgcactacccggcagagtacatggccgccctgctgacctcggtcggggacaacaag
gacaagctcgcgatctacctcggcgagtgccgccggatgcggatcaccgtgctgccgccg
gacgtcaacgaatccgcgcagaacttcaccccggtcggcaccgacatccggttcgggatg
ggcgcggtgcgcaacgtcggggcgaacgtggtcgacggcatcgtcgaggcgcgccaggac
aagggcgccttcacctccttcaccgacttcctcgacaaggtgcccagccacgtgtgcaac
aagcgcacgatcgaatcgctcatcaagtccggcgcgttcgactcgctcgggcacacccgc
cgctcgctcgtcgaggtgcacgaggaggccgtcgactccgtcatcggcgtcaagcggcag
gaggccgcgggccagttcgacctgttcgccgggctcggcggcgacgatgcgagcgagacg
agcttctccgtctcgatccccgaccgcccggagtgggagaagaaggagaagctcgcgttc
gagcgggagatgatcggcctctacgtctccgaccacccgctcaacgggctcgagggcgtc
ctgcagagcgaggcggaggcatcgatcgcggagatcgtcgacccggagaacacccggccg
gagggctcctcggtgaaggtgtgcgggatgatcacgcaggtgcagcgccgggtgtcgaag
aactccggcaagccctacggcatcgtcaccgtcgaggacctcgaggcgagcgtcgaggtg
atgttcttcggcgacgtctacgagcccgtggcgacgctgctcgcgaccgacctcgtcgtc
accgtgacgggacggatccggcgctccgacgaccgcccggcctccctcatggcgcagtcg
atgacgatccccgacgtcaccgaccccgcggaccggccgctccacatcaccatgccggtg
cagcggtgcaccccggagctcgtcgagcagctcggggagatcctgcgcgcgaactccggg
cccaccgaggtccggctcagcctcacccagcccggccgcagcatcgtcatgaagctcgat
gcgagcgtgcgggtgaccccggggccgagcctgttcggcgacctcaaggcgctcctcggc
gcccagtgcctgcaggtgtcctccccgtcgatgttcgggtga
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