Bradyrhizobium sp. SK17: CWS35_18945
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Entry
CWS35_18945 CDS
T05325
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk00521
Streptomycin biosynthesis
brk00523
Polyketide sugar unit biosynthesis
brk00541
O-Antigen nucleotide sugar biosynthesis
brk01100
Metabolic pathways
brk01110
Biosynthesis of secondary metabolites
brk01250
Biosynthesis of nucleotide sugars
Module
brk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CWS35_18945 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CWS35_18945 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CWS35_18945 (rfbC)
Enzymes [BR:
brk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CWS35_18945 (rfbC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AUC96096
UniProt:
A0A2K8YEM4
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All DBs
Position
4135400..4135954
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AA seq
184 aa
AA seq
DB search
MNVIKTALPEVLIVEPKLFGDQRGFFLETYQFPRYVEHGIARPFVQDNMSRSAYGVLRGL
HLQNPFTQGKLVTVLRGKVLDVAVDVRVGSPNFGRHVAVELSEDNRRQLWVPRGFAHGFV
VLSETADFFYKCDDFYSPKDELSIRWNDPAIGIAWGVDKPQLSAKDADAPLLADASNLPT
YGQI
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcatcaagaccgcgctacccgaagtcctgatcgtcgagccgaagctgttcggc
gaccaacgcggcttcttcctggagacctaccagttcccccgttacgtcgagcacggcatc
gcgcgcccgttcgtgcaggacaacatgtcccgctcggcctatggcgtgctgcgcggactg
catctgcaaaacccgttcacccagggcaagctcgtcaccgtgctgcgcggcaaggtgctg
gacgtcgccgtcgatgtgcgcgtcggcagcccgaatttcggccggcatgtcgcggtggag
ctgagcgaggacaatcgccggcaattgtgggtgccgcgcggcttcgcccacggcttcgtg
gtgctctcggagaccgccgacttcttctacaaatgcgatgatttctacagccccaaggac
gagctctcgatccgctggaacgaccccgcgatcgggatcgcgtggggtgtcgacaagcca
cagttgtcggccaaggatgcggatgcgccgctgttggccgacgccagcaatcttccgacc
tatggacaaatctga
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