Bacillus rossius redtenbacheri: 134527270
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Entry
134527270 CDS
T09888
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03013
Nucleocytoplasmic transport
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134527270
09122 Translation
03013 Nucleocytoplasmic transport
134527270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134527270
03041 Spliceosome [BR:
bror03041
]
134527270
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
134527270
Spliceosome [BR:
bror03041
]
Complex C
Other components
EJC/TREX
134527270
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134527270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
134527270
NCBI-ProteinID:
XP_063215868
LinkDB
All DBs
Position
1:212266137..212525246
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AA seq
698 aa
AA seq
DB search
MFPTPDKKRCKKLCFFLLGVEFNVNWSIVCFIMSFEQTRLELTEFVRLGFEKGSIDLLKK
KYDSLKTMDSDKRATLDQVFRDLLLALLSSPQAEVSTWQQFVTYCILACRHDLCTPTMPV
VLLGDIFDALTLDKCEQLFRFVEDNVAVWKEELFFSACKNNLLRMCNDLLRRLSRSQNTV
FCGRILLFLAKFFPFSERSGLNIVSEFNLDNVTEYGGEGGRDVDVLGDKDDAMEEGTKPE
TKMKLDYNLYCKFWALQDFFRNPNQCYNKMEWKTFSSHASSVLLAFKSFKLEHLQLKHSL
PVAEVGKQHYFAKFLTSQKLLELQLSDANFRRYVLLQFLILFQYLHSPVKFKSESCELKV
DQLDWVKETTGLVYSLMAETPPNGPQFVNTVRQILQREEQWNAWKNEGCPEFQRPVQQPG
VDDTAGEEMGDRRRAMNRPRRSKRRLGDLVMEADSQNNVLMGNPELTKLWNLSVSNLDAC
KSKERDFLPSLESYFEEAMEQADPSAMVDDQYKKINDGNFGWRALRLLARRSPHFFTHSN
NPINKLPDYLEMMIKRIMKDRPSAGGVSQASEDCVKAEPVLETEATGVGEAEEMELLKGD
DKEEGAESSQLRSFSTQQLDCLATQLAPHWRKVAYKLGYQKDEVALLERERGTDEERARN
MLQVWAGADEDASPDNLAYTLEGLGLPEAAATLKAASP
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctacccccgacaaaaaacgttgtaagaagttgtgtttttttttgttaggtgta
gagtttaatgtgaattggtcaatagtttgcttcataatgtcttttgagcaaacaagattg
gagttaactgagtttgtacgccttggttttgagaagggaagcattgacttactcaagaaa
aagtatgattctcttaaaacaatggattcggacaagcgggcgacgttggaccaggtgttc
cgtgacctgctcctcgccctgctgtcctcgccccaggcagaggtctcgacctggcagcag
ttcgtgacgtactgcatcctggcgtgtcgccacgacctctgcacgcccaccatgccagtc
gtcctgctgggagacatcttcgatgcgctcaccctagacaagtgcgagcagctgttccgc
ttcgtggaggacaatgtggctgtgtggaaggaagagttgttcttcagcgcctgcaagaac
aacctgctgcgcatgtgcaacgatttgctgagacgactctccaggtcacaaaacacagtc
ttctgtggtcgcattttactgttcctcgccaaatttttccccttttcggagcgttcaggg
ttgaacattgtgagtgagttcaacctggacaacgtgacagagtatggtggcgaggggggc
agagacgtggatgtcctgggggacaaggatgatgccatggaggaaggaacgaaacctgaa
acgaaaatgaagctggactacaacctttactgcaagttctgggcgttgcaggatttcttc
cgcaatcctaaccagtgctacaataaaatggagtggaaaacattttcatcacatgcatcc
agtgtcttgctggccttcaagagcttcaagctggagcacttgcaactgaagcactcgctg
cccgtggcggaggtaggcaagcagcactacttcgccaagttcctcaccagccagaagctg
ctggagctgcagctcagcgacgccaacttccggcgctacgtactgctgcagttcctcatt
ctcttccagtacctgcactcccccgtcaagttcaagtcggagtcgtgcgagctgaaggtg
gaccaactggactgggtgaaggagacgactggtctcgtctactccctcatggcagagact
ccacccaacggccctcagttcgtcaacaccgtccgccagatactgcagagggaggagcag
tggaacgcctggaagaacgagggctgtccagagtttcagcgaccagtgcagcagcctggt
gttgacgacacagcgggggaggaaatgggggatcgccgaagggcaatgaaccgcccgcgt
cgctctaagcgccgcctgggggacttggtgatggaggcggactcacagaacaatgtcttg
atgggcaaccccgaactcaccaagctgtggaacttgagtgtgagcaatctggacgcgtgc
aagtcgaaggagcgtgacttcctgccgtcgctggagagctacttcgaggaggccatggag
caggctgaccccagcgccatggtcgatgaccagtacaagaagataaacgatggtaacttt
gggtggcgtgcgctgcggctgctggctcggaggagcccacacttcttcacgcacagcaac
aaccccatcaacaaactgcccgactacctggagatgatgatcaagaggattatgaaggac
cggccgagtgcaggcggagtgtcgcaggccagcgaggactgcgtgaaggcagagcctgta
ttggagacggaggcgacaggtgtgggagaggcggaggagatggagctgctgaaaggagac
gacaaggaggagggtgcagagagctcacagctacgctccttctccacccaacagctggac
tgcctagccacccaacttgctccgcactggaggaaggttgcctacaagctgggctaccag
aaggacgaggtggcgttgttggagagggagagaggtacagatgaagagcgcgccaggaac
atgctgcaggtgtgggctggggctgatgaggatgccagtcctgacaatctggcctacacg
ctggagggactggggctgcctgaggctgcggcgaccctaaaggctgcctccccgtga
DBGET
integrated database retrieval system
