Brassica rapa (field mustard): 103828405
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Entry
103828405 CDS
T03449
Name
(RefSeq) syntaxin-112
KO
K08486
syntaxin 1B/2/3
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103828405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103828405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103828405
Membrane trafficking [BR:
brp04131
]
SNARE
Syntaxin (Qa)
Stx-PM
103828405
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
103828405
Exosomal proteins of other body fluids (saliva and urine)
103828405
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
CbiC
Retrotran_gag_2
MMPL
DUF724
Muted
FlgN
Cauli_DNA-bind
DUF5847
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
103828405
NCBI-ProteinID:
XP_009102253
UniProt:
A0A397YPN5
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Position
A07:complement(1895941..1904358)
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AA seq
288 aa
AA seq
DB search
MNDLMTKSFLSYVELKKQAKIDTESDHVDVEKGDLHQENLSAFFSEIETIKTLIEEITHL
LHDLKNLNEETKSTHSAKILRGLRDRMESNIVAISRKANAVKTLIEAIETENQKSGSCVD
RTRVSITNGVRAKLRETMSEFHRLRERIFAEYREDLKRKYFLATGEEPSNEDMEKMISGD
GLVKTFEVKPEMDLKTKERHEAVNDIKRSLNRLHQVFLDMAVLVETQGDRVDDIEANVAA
AGSFVSGGTNSLFYANQMKKKNKKWVLWGSILGVIILLVCLVSMLASR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgatgaccaaatcgttcctaagttatgtggaactcaagaagcaagccaag
atcgacacagaatcagaccacgtcgacgtcgagaaaggcgatctccatcaagaaaacctc
tccgctttcttctcagagatcgagaccatcaaaaccctaatcgaagagatcactcatctc
ttacacgatctcaagaacctgaacgaagagaccaagtccacacacagcgccaagatcctc
cgcgggttgagagacaggatggagtccaacatcgtcgccatctctcgcaaggccaacgct
gtcaaaaccctaatcgaagccatcgagacagagaatcaaaagagcggctcttgcgtggac
aggacacgtgtttccatcacgaacggtgtaagggccaaactgagagagacgatgagcgag
tttcatcgcttgagggagaggatctttgctgagtacagagaagacttgaagaggaagtat
tttttggcgaccggtgaggagccaagtaacgaggacatggagaagatgatatctggagat
gggttagtgaagacgtttgaagtgaagcctgagatggatttgaagacgaaggagagacat
gaagctgtgaatgacattaagaggagtcttaacaggcttcatcaagtgtttctcgacatg
gctgttcttgttgagacgcaaggagatagggttgatgacattgaagctaatgtggctgct
gcagggagctttgtgagtggaggaactaacagtttgttctatgcgaatcagatgaagaag
aagaacaagaagtgggttctatggggttcgattttgggtgttatcattcttcttgtgtgt
ttggtctctatgcttgcttctcgttga
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integrated database retrieval system