Brassica rapa (field mustard): 103832578
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Entry
103832578 CDS
T03449
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103832578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103832578
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103832578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
103832578
NCBI-ProteinID:
XP_009106863
UniProt:
M4EPY1
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Position
A08:376149..385042
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AA seq
1788 aa
AA seq
DB search
MGKFEIIEEVEGDRVGTTDYYFDRIGEPLSIKEEDAQYDLENPPSQPLAISERRGLVFIA
HSSGFLVGRTKDVIAASKNSNGKGSRVCIQEIALVDVPVGDVRILSLSADDSILAASVDA
EIHFFSVDSLLNKDAKPSFSYSPDDSGFVKDFRWTRKDKHSYLVLSSNGKLFHGTDSAPP
KHVMDGVDAVEWSSKGSYIAVAQDNSLRILSSKFNEKRCIALSFDSWIGDSDEDCVVKVD
SIKWVRQNCILLGCFQLIDGMEENYLVQVIRSPDGKITDGSSNLVALSFSDLFPCSMDDL
VPVGVGPHLLFSYVDQCKLAITANRKSIDEHIVLLNWSPGDDESAVSVVDIDRETFLPRI
GLQENGDDNMIMGLCVDMVSVEGTVNVRSGGDELKELPPFCVLACLTLEGKLVMYNVASV
SGLPDSSDVDLASSSDIEDAYAPSVGDDLPGQSSEESEQQRKFNFSVQNEQKHLNSENSV
SLLPTEQRFPKEEISKKETESVKSSVSGDNNVKQEPHAGKLLQAADGQQSMIPRQFGTSF
VQPPSSVGFETKKFAGFGHIFPVPDKPQKDISEQSKSMNFQTSFGSKSTPGLFAFSGPQN
ASVTPPQNTPAQLWSSGKGVSPPSFGSGLFPSVKDTQQKQPEQTGTGYVNPPTCIREKPV
QAIETTRASALSILTPPLGQSQDADEGVEKIDPLPSIRASQLSLQVKSSFEKSSNHQQHK
TPLNAGPLRLEHAMSKQPSNINEMAREMDALLQSIEGPGGFKDSCTSLLTGHIEELEQGL
EILAGKCQTCKSITHEQQGEIQHLLDKTIQVLAKKLYMEGMYKQTSDDQYWQLWNRRRLN
PELEAKRQHIVKLNKDLTHQLIELERYFNRLELDRYQDDGGLPLSRRGVPNRSAPSRRVQ
SLHSLHNTMSSQLAAAEQLSDCLSKQMTFLKIDSPVKKNVKQELFETIGIPYDASFNSPD
AVKANNASSAKNLLLSSIPASINAQSKQRQSSGTKSSDPETARRRRESLDRNWAAFEPPK
TTVKRMLLQEQQKSGTNQQIVSSERLRPKVDTQEQSLLRLKDHASPVVSSNKGIMKSFQQ
NTSEAQSTPFKSTRAMPQSNSPFNHSSASASKPSFNWSGNKSNSIASYAEESAPSQSKDT
KTPTVFEQTEKKAGGFKLPEGKANMFPDRSAGSVQRPTGAPVQSQFSFNTNSSMPGNRLT
FPAATVSASSSPLSSTSLDSVSTLPTPSSRSLPTSTKDSVSAPTSIPISLASVPQTLSVA
PTSTVSATGISVPFGKSLTSASLDLNQAATSTPSPSPGPTAGFSFKLPASSPSSPEIVSS
STGQSSVVPPSSTASQVSTSLVSATSSPTDSNRLFSSTSSSLTPPITSTAPGAFKFPQVS
TPSSAVSTAEPVSEPKKLETQSSSILSTGSTAEPVAKAATSQTELLPVKSEISTSETTVT
APVSTSGFLSGFSSATQSSPVIMAPPSFSWPGSSQPQQPSPTPVSFPTSFSTSASPLGEK
KDTVDTQEDEMDEEAPEASPAAELSMSGFGGFGLGSIPNPAAPKSNPFGGSFGNATTATS
NPFNMTVPSGELFRPASFSFQNPQPSQRTGFGGFSTTPSQTPTQGGFGQPSQVGVGQQAL
GSVLGSFGQSRQIGAGLPGATFGSPTGFGGSSPGSGLPNAPASGGFAAAGSSATGGFAAM
ASTGRGFAGASSSPTGGFAGLASGSGGFGGAAPGGGAGGGFGGVGSGSGGFGSFAPPNSG
GFAGASGGGGFGGFGGQGQGGGGGFSGFGGNTGGAGGKPSELFTQMRK
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatttgagataatagaagaggtggaaggagatcgcgtcggaactacagattac
tacttcgacagaatcggcgaacctctctcaatcaaggaagaagacgctcagtacgatctc
gaaaaccctccgtcgcagcccctcgctatctccgaacgccgcggcttagttttcatcgca
cattcctccgggtttctcgtcggaaggactaaggatgtgattgctgcttccaagaacagt
aacgggaaaggaagtagggtttgtatccaggagatagctcttgtggatgttcctgttgga
gacgttcgtatactgtctctctcagctgatgattcgattctcgcggcctctgtcgatgct
gagattcacttcttctctgtggattctcttcttaacaaggatgcaaagccttctttttct
tattcacctgacgattcaggctttgttaaggattttcggtggacaaggaaagataaacat
tcctatcttgttctttcaagcaatgggaagctctttcatggaactgatagtgcaccccct
aaacatgttatggatggtgttgacgccgttgaatggagttcaaaaggaagctatattgct
gtggctcaagataatagcctgcgtattttgtcgtcaaagtttaacgagaagcgttgcata
gcactatcatttgactcatggattggtgactctgatgaagactgtgttgtgaaagttgat
tctatcaaatgggtacgccagaactgtattctgctcggatgctttcagctgattgatggc
atggaagaaaattacctcgttcaggttatcaggagtccagacgggaagattactgatggt
tcgtctaatttggttgctttatcattctctgatttgtttccatgttcaatggatgatctt
gttccggttggtgttggacctcatttactctttagctacgtagaccaatgcaaactggca
atcacagcaaacaggaagagcatagatgagcatattgttttacttaattggtcacctggt
gatgatgaaagtgcagtttccgttgttgacattgaccgagagacctttttgccaaggatt
gggctccaagaaaatggagacgacaacatgatcatgggactctgtgtcgatatggtttct
gttgaggggaccgttaatgtccgttccggaggtgatgaactgaaagaactccctccattt
tgtgttctcgcatgcctcactttggaaggaaagctggtcatgtataatgttgctagtgtt
tcaggactcccagattcatctgatgttgatttggcttcttcttctgatatagaagatgct
tatgccccttcagttggagatgatcttcctggacaatcttcggaagagtctgaacaacaa
cgaaaatttaatttttcggtacaaaatgaacagaaacaccttaactcagagaattcagtt
tctctgttgcctaccgaacaaaggttcccaaaggaagaaatttctaagaaggaaactgag
tctgtaaaaagttcagtgtctggggacaacaacgtgaaacaagaaccccatgctggaaaa
ttattacaagccgcagatggtcaacaaagcatgattcctcggcagttcggaacaagtttt
gttcaacctccttcgtccgtaggatttgaaaccaaaaaatttgcaggattcggtcatatc
ttccctgttcctgataaacctcagaaagatatatcggagcagtctaagtctatgaatttt
cagaccagttttgggtcaaagagtacaccaggtttatttgcattttccggcccgcagaac
gctagtgttacgccaccacaaaatacaccagcgcagctatggtcaagtgggaaaggcgtc
tcacctccaagttttggctccggtctgtttccatcagtgaaagatactcagcaaaagcaa
cctgaacagaccggaactggttatgtgaatcctcctacgtgcatcagagagaagcctgta
caagctattgagactactagagcatcagcgttgagcattctaactcctccgctaggccaa
agtcaggacgctgatgaaggggtagaaaaaatcgatcccctaccgtctatccgtgcctct
cagctgtcactacaagtgaaatcttccttcgaaaagtcctctaatcatcagcagcacaaa
actccgctcaatgctggacctctgagacttgagcatgccatgtcaaagcaacccagtaat
ataaatgagatggccagagaaatggatgcccttttacagtccattgaaggaccaggtggt
ttcaaggattcttgcacctcattacttacaggtcatattgaagaattggagcaaggactt
gaaattcttgctggcaagtgccaaacgtgcaagagcataactcacgaacagcaaggagag
atccaacatcttctggacaaaacaattcaagttttggcaaaaaagttatacatggaaggc
atgtataagcaaacttctgatgaccagtattggcaactttggaaccgccggaggctgaat
cctgagcttgaagccaaacggcagcatattgtgaaactaaacaaggatttgactcatcaa
ctgattgaactagagagatactttaatcggcttgaactggatcgctaccaagatgatgga
ggacttcctctgtcccgaagaggtgtgccaaataggtctgctccttcaagacgtgtgcaa
tcccttcatagccttcataacacaatgagttcccaattggcagctgctgagcaactctct
gactgtctctcaaaacaaatgacctttttgaaaattgattcacctgtcaaaaagaatgtg
aagcaggagttgtttgagacaatcgggatcccttatgatgcttcattcaactcgccagat
gctgtaaaagccaacaatgcatcgtcagctaaaaacctattactctcttcgattcctgca
agtataaatgcacagtcaaaacaacgccagtcatctggtacgaaaagttccgaccctgaa
actgccaggaggaggagagaatcattagacaggaactgggctgcttttgagcctccgaaa
acaactgttaaaaggatgcttctgcaggagcaacagaagtcgggtacgaaccaacagatt
gtgtcgagtgagagattacggcctaaggttgatacacaagagcaatcactgcttcgcctg
aaggatcatgcatcacctgtagtctcctccaataagggaataatgaagtcattccaacaa
aacacatctgaagctcaatcaaccccgttcaaatcaacgcgagctatgccacaatctaac
agtccctttaaccactcttcagcatctgcatcaaagccaagtttcaattggtctggaaat
aagtcgaacagtatagcttcttatgctgaggaatctgctccgtcgcagagtaaggataca
aagacaccgacggtatttgaacagacagaaaagaaggctggaggatttaaacttcctgaa
ggcaaggcaaatatgttccctgatagatctgctggaagtgtgcagcggcctactggtgca
cctgtgcaatcacagtttagtttcaataccaatagcagtatgcctggtaatagattaact
tttcctgctgcaacggtatcagcttcttcttcacctttgtctagcacgtcacttgattcc
gtttccaccttacctacaccgtcatcacgttcattgccaacctctacgaaagattcagtt
tcagctccaacatctattcccatcagcttggcatcagtcccacaaacactttcagtcgca
ccgacatctacagtttcagctacggggatcagtgttccatttggtaaatcgttgaccagt
gccagtttagatctcaatcaagcagctacgtcaacaccatctccatcacctggccctaca
gctggtttctcttttaagttaccagcttcttctccatcatcccctgaaattgtctcatct
tcaacaggccaatcatcggttgttccaccatcttcgacagcatcacaagtgtcaactagt
ctggtctcagcaaccagttccccaacagacagcaatcgtttgttttcatcaacctcttca
tctttaactccccctattacttctaccgctcctggcgcgtttaagtttcctcaagtttct
accccgtcgtctgctgtgtccactgcagagccagtctcagaacctaaaaaactagagact
caaagttcctcaattctaagtacgggaagtactgcagagcctgtagcaaaggcagcaaca
tcacagactgagctgctgccggtgaaaagtgaaatttcgacctcagagactacagtaaca
gcccctgtcagtacatctgggttcctttctggattttcatccgcaacacagtctagtcct
gtaattatggcgcctccttcattcagttggcctggtagttctcagccgcaacagccatcg
ccaacacctgtctctttccctacatccttttcaacttcagcaagtccattgggtgagaaa
aaagacactgtagatacacaggaagatgaaatggacgaagaagctccagaggctagccct
gcggctgaacttagtatgagtggttttggaggttttgggcttgggtcaattccaaacccg
gctgctcccaaatcaaatccatttggtggttcctttggtaatgctacaacagcaacaagt
aatccgttcaatatgacagtccccagtggcgagctattccgacctgcatcattcagtttt
caaaatcctcaaccatctcaacggacaggatttggcgggttttctacaacgccttctcaa
actcccactcagggcggatttggccaaccgtcgcaggttggcgtaggacagcaagctcta
ggatcggtactgggttcatttgggcagtcgaggcagattggtgctggtctcccaggagct
acgtttggttctcctaccggatttggtggctctagcccaggaagcggcctcccaaatgca
ccagcatctggtggttttgcagctgctggctccagtgctactggtggctttgccgccatg
gcttcaactggtaggggattcgcaggtgcttcttccagtccaactggtggattcgctggc
ttagcctcaggtagtggtggtttcggcggtgctgctccaggaggaggggctggtggtgga
tttggtggagttggttcaggctcgggagggtttggaagctttgctcctcccaatagtgga
ggttttgctggagcatcaggaggtggtggttttgggggtttcggtggccaagggcaaggc
ggtggtggtgggttctcagggtttggtgggaacacgggaggagcaggaggaaagccatcg
gaactcttcacacagatgagaaaatga
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integrated database retrieval system
