Brassica rapa (field mustard): 103837769
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Entry
103837769 CDS
T03449
Name
(RefSeq) zinc finger CCCH domain-containing protein 19
Organism
brp
Brassica rapa (field mustard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
GYF
SWIB
zf-CCCH
zf_CCCH_4
GYF_2
zf-HC5HC2H
zf-HC5HC2H_2
C5HCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
103837769
NCBI-ProteinID:
XP_009112389
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All DBs
Position
A09:complement(6058095..6066550)
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AA seq
1872 aa
AA seq
DB search
MDSDSAKASVESMRDDPKCIHVSNDPNLAGTCGESSVAAEEGGGCDGATGAKGIDAVDTA
AAVLNPVAEMSGVVDAVVSADLSPVAAEGGGEEDASFIAQECGSLDLVGGGAAVEVVSPV
VGEGGEEDRAAEQSDSAANLLGLGCEKVSISGDNLEESKEEEPSASEVNGDDSLREGSQE
VVCGGMADEKSSQAIESKLDVMEEDTAAQAASLEDIVSVDIDIPDVKDVASVAGFTEISS
QDKGLGDSVPLEQEPLKELQIVEEAKDLTDGDAKEDMDVAEGAMGNLMTEEEEKPDDITV
LEIKTKPQDVDDVANEGSEKNETRVGESSVDKETVMDDVKEDVEKDPEAGKSVDMHVPES
AEEVETYVKYGDGIEEEGEGMACVGEAEQTVDLEETQKLSEELAKVDETKIAEASEEIGT
VIRHGDDMTDMTEDVKIHGNSSVADIEGGREDLEEMGVTEALEETVMDKVEGTKIAEVSE
ETETRIEDEDQEKDDDMTDVKTHADSLVADIEEGKEIQEEMGLADMTETQEETVEGKAVR
TKVAEASEETETRSVDVDQEKDENMMDVKTLGDSSVADTEEEKKRQEEMGMAEMTETQEE
TVEGKVDGTKASELSEETEARTEDEDEEKDENMTDAETHVDSSLADIEEGKESQEEIEMT
ELSATQDESVTAETGDEDAEDVEEENKGVGGKRKRVRNTKTGKKKEEDVCFICFDGGDLV
LCDRRGCPKAYHPSCVNQDEDFFRSKGKWNCGWHQCSKCEKTATYLCYTCVFSLCKGCAK
DAVFFCIRGNKGFCETCMETIKLIEREEQEKKEPAQLDFDDKTSWESLFKDYWIDLKTQL
SISPEELDQAKSPQKGNKSNAGKQGTAREIDYGTDEGSDSDSSPKKRKTRSRSKSGSAEK
NQSPANKSSSGETWASKELLDVVAHMRRGDRSFLPSTEVHALLLDYIKKYNLRDPRRKSQ
VVCDSRLKNLFGKSHVGHFEMLNILDTHFLDKEQQQADNIQGSIVDTDPDYVDLDENVDH
PVKSAKDKKRKTRKKGARKGRQSNLDDFAAVDMHNINLIYLRRSLVEDLLEDSTAFEEKV
ASAFVRLRISGNQKQDLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKTEVISIDII
SNQDFTEDECNRLRQSIKCGLINRLTVGDIQEKAIALQEVRVKNLLDAEILRFSHLRDRA
SDMGHRKELRECVEKVQLLKSPEERQRRLEEIPEIHADPKMDPDYESEDEDEKEEKEKEK
SLRRRSSSFNRRGRDPISPRKGGFSSNESWTGTSNYSSTSANRELSRSYSGRGSNGRGDY
LGSSDDKVSDSLWNSGREREKDMQQYLGTEKPRTVSLPEPPPRSSRAVAPPELSPRIAPV
ISTPPPPVVPQPAPKSNESEKMWHYKDPSGKVQGPFSMAQLRKWNNTGYFPAKLEIWKAN
ESSLDSVLLTDALAGLFQKQGQSVDNSYTKAYSGQSSQSEPNIGSSARTAPSVLDIPKNS
QDTWSSGGSLPSPTPTQMTTPTAKRRSFESRWSPTKPSAQSAVQSMSFPSAQSVPSQASR
TDIPVVVNTASALQPGTHPIPTPDRANVSVNHYGSSGPLPSPTPVGGMQSWGNMQTDKFD
LHGRGRGDAPFSSQNSSASYGTTTPSALTSQSQPGFPASDPWRAPVPSQSNTQTQAPAWA
MNTSQNSGQPQAPTNQNSSWGQATVVNPNMGWAGPPQAGMSVNWAASSVPPTGQGMPNPG
WGGPAQVQQPQAYPNSGWGVTGQAQSQAQVQAPGSSTSSGWMQTGQGMQSGNSNQNWGTQ
NQTAMPSGGSGGNQTGYWGNQQNQNGDSGYGWNRQSSGSGGHNNNFKGQRVCKFHRENGN
CRKGAACTYLHN
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggattccgactcggcgaaagcttccgttgagtcgatgcgtgatgaccctaaatgtatt
cacgtttcgaacgaccctaatctcgcaggaacgtgcggcgaatcttccgttgccgccgag
gaaggcggcgggtgcgatggagctacgggtgcgaaaggaattgatgcggttgacaccgcc
gctgcggttttgaatcccgtcgctgagatgagtggtgtggttgatgccgttgtttccgca
gacctgtctccggtggccgcggagggaggcggagaagaggatgcgagtttcattgctcag
gagtgcggttccttggatttggttggtggtggcgctgcggtggaggtggtttctccggtg
gttggtgaaggaggagaagaggaccgcgcggctgagcagagtgactcagcagctaatttg
ttagggttaggttgtgaaaaggtttcgatttcaggagacaatctcgaggaaagcaaagaa
gaagagccttcagcttctgaggtaaacggagatgattctctgagagagggaagccaagag
gtagtttgtggaggtatggccgatgagaagagtagtcaggcgatagagagtaagcttgat
gtcatggaggaggacactgcagctcaagctgcctccttggaagatatagttagtgttgac
atagatattcccgatgttaaagatgtagctagcgtggctggttttactgaaatttcatct
caagataaaggtttaggcgattcagttcctttagagcaagagccattaaaagagttgcaa
attgttgaagaagctaaagatctgacagatggagatgcaaaagaagacatggatgtcgca
gaaggtgctatgggtaatctgatgaccgaggaggaagaaaagcctgatgatattactgtg
ttggagatcaaaactaagccccaagatgtggatgatgtggctaatgagggttcagaaaaa
aatgagactcgagtgggtgaatcgtctgtagataaggaaactgttatggatgatgtcaaa
gaagatgttgagaaggacccagaagctggtaaatcagtggacatgcatgtaccagagtct
gcagaagaagtggaaacatatgttaaatatggtgatgggatagaggaagaaggtgaagga
atggcttgtgtaggtgaagcagaacagacagttgatttggaggaaacccaaaaactatct
gaggaactggctaaagtagacgaaacaaagattgctgaagcatctgaagaaatagggaca
gtgatcagacatggggatgacatgactgatatgacggaagatgtgaaaatccatggaaac
tcctcggtagctgatattgagggcgggagggaagatcttgaagagatgggagtaacagaa
gcactggaggagactgttatggataaagtggagggaacaaaaattgctgaagtctcagaa
gaaacagaaacaaggatcgaagatgaggatcaggaaaaggatgatgacatgactgatgtg
aaaacgcatgcagactccttggtggctgatattgaggaggggaaggaaattcaggaagag
atgggattagcagatatgacagagacacaggaggagactgttgagggtaaagcagtcaga
acaaaagttgctgaagcatcagaagaaacagagacaaggtccgtagatgtggatcaggag
aaagatgaaaacatgatggatgtgaaaactcttggagactcatcggtagctgatactgag
gaggagaagaaaagacaggaggagatgggaatggcagaaatgacagagacacaagaggag
actgttgagggtaaagtagacggaacaaaagcttctgaactgtcagaagaaacagaggca
aggaccgaagatgaggatgaggagaaagatgaaaacatgactgatgcggaaacgcatgta
gactcctcattagctgatatagaggaggggaaggaaagtcaggaagagatagaaatgaca
gaactatcagcgacacaggatgagagtgtaacggctgagacgggggatgaagatgcagag
gacgtcgaggaagaaaataagggtgttggaggaaagaggaagcgggtgagaaatacaaag
acaggaaagaaaaaagaggaagatgtttgtttcatatgctttgatgggggtgaccttgtc
ctttgtgaccgcaggggatgcccaaaagcttaccacccttcctgtgtaaatcaagacgag
gattttttccggtcaaagggtaaatggaactgtggatggcaccagtgtagcaaatgtgag
aaaactgcgacatacttgtgctacacatgtgtgttttcattatgcaagggctgcgccaag
gatgctgtctttttttgcataagaggtaataagggtttctgtgaaacatgcatggagaca
atcaagttgatagaaagagaggagcaggaaaagaaggagccggcgcagttggattttgac
gacaagaccagctgggaatctctcttcaaggattactggattgatttgaaaacgcagcta
tctataagtccagaggaacttgatcaggctaagagcccacagaaaggaaataagtctaat
gctggtaaacagggaacagccagggagattgactatggaactgatgaaggatcagattcg
gatagttctcccaaaaagaggaagaccagaagtcgatcgaagtctggttctgcggagaaa
aaccaatctccagctaataaaagctcgtcaggtgaaacgtgggcttccaaggaacttttg
gatgttgtcgctcacatgagacgtggtgacagatctttcttaccttccacagaagtacac
gcgctcctgctggattatataaaaaaatataatcttcgtgatccccgtcgtaaaagccaa
gttgtttgtgactccaggcttaagaatttgttcgggaaatctcatgttgggcactttgag
atgttaaatatccttgatacccatttccttgataaagagcagcagcaggcagataatatt
caaggtagcattgttgatacagaccctgactatgtggatcttgatgaaaacgtggaccat
ccagtgaaaagtgcgaaggataagaaacgtaaaacacgtaaaaagggtgcaaggaaaggg
cgtcaatccaatcttgatgattttgccgctgttgatatgcacaacatcaatttgatatac
ttgaggcggagcttggtggaagatctacttgaagattctacagcgttcgaagaaaaagta
gctagtgcatttgttaggttaaggatatctggaaatcaaaagcaagatttatatcgactg
gttcaagttgttggcacaagcaaagctcctgaaccctataaagttggcaaaaaaacaaca
gactatgtacttgagatattaaacttggacaaaacagaagtgatatccatcgacattata
tcaaatcaagatttcactgaggatgaatgcaatcgtctaaggcagagcataaaatgtgga
ttaatcaacaggctgacagtgggtgatatacaagaaaaggccatagcgctgcaggaagtg
agggtaaaaaacttgttggacgcagagatcctacgtttcagtcatttgcgtgatcgtgct
agcgacatgggccacagaaaagagctgcgagaatgtgttgagaaagtgcaactgctgaag
tctccagaggaacggcagcgtaggctagaagaaattccagaaatacatgctgatcccaag
atggacccagattatgagtccgaagacgaagatgaaaaagaagaaaaagaaaaagagaaa
agtctgaggagacgaagtagtagcttcaacagaagaggaagagacccgatatctccacga
aagggaggatttagttccaatgaatcatggactggcacaagtaactactcaagcacaagt
gcaaatcgtgagttaagcagaagttactctggtagaggctctaatggaagaggggattat
cttggtagttctgacgacaaggttagtgatagtctgtggaattcaggtagagaaagagaa
aaagacatgcaacaatatttaggcactgagaagccgagaactgtttctctccccgaacct
cctcccagaagttcccgtgctgttgcgccaccagaattgtctcctagaattgcccccgta
atctcaacgccacctcctcctgttgttccgcagcctgctcccaagtcaaatgagtcagag
aaaatgtggcattacaaggacccatctggtaaagttcaagggcctttttcaatggcgcag
ctccgtaagtggaacaacactgggtacttccctgctaagttggaaatctggaaagccaac
gagtcatcgttggactctgttctcctgactgatgcattggctgggctgtttcagaagcaa
ggccagtcggtggataatagctacacgaaagcttattctggtcaatcaagccaatctgaa
cccaatataggttcttctgctaggaccgctccatcagtccttgacattcccaagaattct
caggatacttggagttcaggtggaagccttccatcgcctactccgactcaaatgacaacc
ccaacggcaaaaaggagaagttttgagagcagatggtctccaaccaagccttctgcgcag
tcagctgttcagtcgatgagttttccttcagcacaatctgtcccgagtcaagcttcaagg
acagatatccctgtggttgtaaacactgctagtgcattgcagcctggaacccacccaatt
ccaacaccagatcgggctaacgtttctgttaatcactatggttcttctggtcctcttcca
tctccaacaccggtaggcggaatgcaaagctggggtaacatgcagacggataaatttgat
ttacatggtcgtggtagaggtgatgctccattttcttctcagaatagttctgcgtcttat
ggcaccacaactccaagtgctctcacctcgcaaagtcaaccagggtttccagcatctgat
ccatggagagctcccgttccaagccaatcaaatactcagactcaggcaccagcatgggct
atgaacaccagtcaaaactcaggacaacctcaggctccaacaaaccaaaacagcagctgg
ggtcaagcgactgttgtaaatccaaacatgggatgggctggtcctcctcaagctggaatg
agcgtaaactgggctgcatcttcggttccaccaactggtcagggaatgcctaatcctgga
tggggcgggcccgcccaagtacaacaaccacaagcttatccaaactccgggtggggtgta
acaggtcaagctcaatcccaagcccaagttcaagctccagggagtagtacaagctctgga
tggatgcagacaggtcaagggatgcagtctgggaacagtaatcaaaactggggaactcaa
aaccagacagcaatgccaagcggtggctcaggagggaaccaaactggttactggggaaac
caacagaaccagaatggagattctgggtatggttggaataggcagtcaagtggaagtggt
gggcataataacaacttcaaagggcaaagagtatgcaagtttcatcgagaaaatggaaat
tgcaggaaaggagcagcctgcacttacctccacaactaa
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integrated database retrieval system
