Brassica rapa (field mustard): 103839008
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Entry
103839008 CDS
T03449
Name
(RefSeq) ABC transporter B family member 13 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103839008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brp02000
]
103839008
04147 Exosome [BR:
brp04147
]
103839008
04090 CD molecules [BR:
brp04090
]
103839008
Enzymes [BR:
brp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103839008
Transporters [BR:
brp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103839008
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103839008
CD molecules [BR:
brp04090
]
Proteins
103839008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
AAA_30
AAA_21
RsgA_GTPase
Zeta_toxin
AAA_23
AAA_7
nSTAND1
AAA_24
DEAD
P-loop_TraG
Mg_chelatase
DUF87
Motif
Other DBs
NCBI-GeneID:
103839008
NCBI-ProteinID:
XP_033137133
LinkDB
All DBs
Position
A09:29175995..29182813
Genome browser
AA seq
1239 aa
AA seq
DB search
MDSTEPSSNGSIHTETDSKKKDSVSLMGLFGAADKLDCFLMILGGLGACTLGATLPLFFV
FFGKMLDSLGNLSTDPKSLSSRVSKNALDLVYLGLVTFLSAWIGVACWTQTGERQTARLR
IKYLKAILAKDITFFDTEARDSNLIFHISSDAILVQDAIGDKTGHVLRYLSQFVAGFVVG
FLSVWQLTLLTLAVVPLIAIAGGGYAIIMSTISEKSEAAYADAGKVAEEVISQVRTVYAF
VGEEKAVNSYSNSLKKALKLCKRSGLAKGLGVGLTYSLLFCAWALLLWYASLLVRHGKTN
GAKAFTTILNVIFSGFALGQAAPSISAISKGRVAAANIFRMIGNKTLEGSERLDNGTTLQ
NVAGKIEFHQVSFAYPSRPNMVFENLSFTIPSGKTFAFVGPSGSGKSTIISMVQRFYEPN
SGEILLDGKDIKSLKLDWLREQMGLVSQEPALFATTIASNILLGKENANMDQIIEASKAA
NADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEK
IVQQALDNVMEKRTTLVVAHRLSTIRNVDKIVVLRNGQVVETGSHSELLSRGGDYAALVN
VQETEPQENPRSIMSETGKSQAGSSSSRRVSSSRRTSSFREVQEKTDKDSNGEDLSSSST
IWELIKLNAPEWPYALLGSIGAVLAGAQTPLFSMGIAYVLTAFYSPSPSVIKRDVDKVAI
VFVGIAVVTAPIYLLQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENNTGSLTSI
LAADATLVRSALADRLSTIVQNLSLTVTALAIAFYYSWRVAAVVTSCFPLLIAAALTEQL
FLKGFGGDYTRAYSRATSVAREAIENIRTVASFGAEKQISEQFACELSKPTKSAFLRGHI
SGIGYGFSQFLAFCSYALGLWYVSVLIKHKETNFSDSIKAFMVLIVTAFSVAETLALTPD
IVKGTQALGSVFRVLHRETEIPPDQPNSRLVTQIKGDIEFRNVSFAYPTRHDVPIFQNLN
LRVSARKSLAVVGPSGSGKSTVIGLIMRFYDADKGNLCIDGKDIKTLNLRSLRKKLALVQ
QEPALFSTTIYENIKYGTENASEAEIIEAAKAANAHEFISRMEEGYKTHVGEKGVQLSGG
QKQRVAIARAVLKNPSVLLLDEATSALDTTSEKLVQEALDKLMKGRTTVLVAHRLSTIRK
ADTIAVLHKGKVVEKGSHRELVSISNGHYKQLTSLQEVV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggatagcacagaaccttcctctaatggaagcatccatactgagacggactcaaagaaa
aaagactccgtttcattgatgggtttgtttggagcagcagataaacttgattgctttctg
atgattctaggcggtttaggagcgtgtactcttggcgctacgcttcctctcttctttgtc
ttcttcgggaaaatgctagactctcttggaaatctttctacagatcctaaatccctatct
tcccgcgtttcaaagaatgctctagacttggtgtacttaggactggtcacttttctatca
gcctggattggagttgcatgttggacgcaaacaggagaaagacaaacagctagattgcgc
ataaaatatctcaaagcaatcttagcaaaagacattactttctttgatacagaagctaga
gattcaaatctcattttccacatctcaagtgatgctatattggttcaagatgcaattggt
gataagacaggccatgtattgcggtatctatctcagttcgtagccggattcgtggtaggg
tttttgtcggtatggcaactaacgctgctcacgttagcagtggttccattgatagcaatt
gcaggtggagggtacgctataatcatgtctaccatctcagaaaagagcgaagctgcttat
gctgatgcaggcaaagtagctgaagaggttatttcacaggtgagaacagtgtatgcattt
gtaggagaagagaaagctgtaaactcttactcaaactctctcaagaaagctctgaaactc
tgtaaaagaagcggtcttgctaaaggcttaggagttggattaacatatagcctattattt
tgtgcttgggctttgcttttgtggtacgctagtcttcttgttcgccacggcaaaaccaac
ggcgcaaaagccttcacaacgatcctcaatgtcatttttagcggatttgccttaggtcaa
gccgcgccaagcatatcagctatctccaaaggcagagttgctgctgcaaatatattcaga
atgataggaaacaagactcttgaaggttctgaaagattagacaacggaacaactttgcaa
aatgtagctgggaagattgagtttcatcaagtgtctttcgcttatccttcaagaccaaac
atggtgtttgagaatcttagtttcactataccttcaggcaagacttttgcatttgtcggt
ccaagtggttcagggaaaagcacaatcatatcaatggtacaacgtttctatgaacctaac
tcaggggagattctcttggatggaaaggacatcaagagcttgaagctggactggttgagg
gagcagatgggcttagtgagccaagaaccggccttattcgccacaactatagcttccaac
attcttcttggtaaagaaaatgctaatatggatcagatcattgaagcttctaaagcagcc
aacgcagattctttcattaaatcattacctaatggttacaatactcaggttggggaagga
ggaactcagctctcaggaggacagaagcagaggattgctattgctcgagcggttctaagg
aatccaaagatactactattagatgaagcaacaagcgcacttgatgctgagtcagagaag
attgtgcagcaagcacttgacaatgttatggagaaaagaacaacactagtagttgctcat
agattgtccaccatccgtaatgtggacaagattgttgtattgagaaatggtcaggttgtg
gaaactggcagccactcagaactgctttcaagaggaggagattacgcggctcttgtgaat
gtccaagagacagagcctcaagaaaaccctagatcaattatgtcggaaaccggtaagtct
caagctggttcttctagttcaagaagagtttctagctcaagaaggacctcaagcttcagg
gaagtccaagagaaaactgataaagattctaatggagaagatttaagctcgtcttcaacg
atatgggaactaataaagctgaatgctccagagtggccatatgcgttacttggctcaatt
ggtgcagttcttgctggagcacaaactccattgttctccatggggattgcttatgtctta
accgcgttttattcgccttcacctagtgtgatcaagcgtgacgttgataaggtagctatt
gtctttgttgggattgcagttgtaacagctcctatctatctccttcagcattacttctac
acacttatgggagagcgtcttacctccagggttcgcttatccttgttctcagcgattctt
tcaaatgagattggatggtttgatttagatgagaacaacactggctcgctcacttcaatc
ttggctgctgatgctactttggtgaggagtgctctagctgatcgcctctcgacaatagtt
caaaacctctctcttacagtgacagcattagcaatagccttttactacagctggcgtgta
gcagctgtagtaacttcttgtttccctcttctcattgctgctgcacttaccgagcaactg
tttctaaaaggctttggaggagattacacaagggcttactctagagcaacttcagtggcg
cgtgaagctattgagaatataagaactgtggcttcgtttggtgctgagaagcagatctcg
gaacagtttgcttgtgagctaagcaaacccaccaagagtgcctttctcagaggccatatc
tctggaattggatatggtttttctcagtttcttgccttctgttcatacgctcttggtctc
tggtacgtctcggttttgattaagcacaaggagactaatttttcggatagtatcaaagct
ttcatggtattgatcgtcacggctttctcagtagcggaaacccttgctttgacaccagat
atcgtgaagggcacgcaagcactcggctcggtttttagggttttgcatagagagactgag
atacctccagatcagcctaactcaagattggtcactcagatcaaaggagatattgagttt
agaaacgtgagctttgcgtatcccacaagacatgatgtccccatttttcaaaacctaaac
ctaagagtctcagcccggaaaagtcttgcggtcgtgggaccaagcggttcgggcaagagc
acggtgatcggtctgattatgagattctacgatgcggacaagggcaatctctgcatcgat
gggaaagacataaaaaccctaaacctacgtagcttgcggaagaagctagcgttagtccag
caagaaccagctctgttttcaacaaccatttacgagaacatcaagtacgggaccgagaac
gcgtcggaggcagagataatcgaagccgcgaaagctgcgaacgcgcacgagttcataagc
aggatggaagaagggtacaagacgcacgtgggtgaaaagggagtgcagttatcaggtggt
cagaaacagagagtggctatcgctagggctgttttaaagaatccttcagtgcttctcctt
gatgaggcaacgagtgctttggacacgacctcggagaaactggtccaagaggcgcttgac
aagcttatgaagggacgaaccacggttctggtggctcataggctctcgacaataagaaaa
gcagacacgatcgctgttttgcacaagggaaaagtcgtggagaagggaagtcatagagag
cttgtttccatatctaatggacattataagcaattgacaagtcttcaagaagtggtatga
DBGET
integrated database retrieval system
