Brassica rapa (field mustard): 103839196
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Entry
103839196 CDS
T03449
Name
(RefSeq) ABC transporter B family member 22-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103839196
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brp02000
]
103839196
04147 Exosome [BR:
brp04147
]
103839196
04090 CD molecules [BR:
brp04090
]
103839196
Enzymes [BR:
brp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103839196
Transporters [BR:
brp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103839196
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103839196
CD molecules [BR:
brp04090
]
Proteins
103839196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
AAA_21
ABC_ATPase
AAA_23
Zeta_toxin
AAA_30
RsgA_GTPase
AAA_15
DEAD
DUF87
nSTAND1
AAA_28
DUF2875
Motif
Other DBs
NCBI-GeneID:
103839196
NCBI-ProteinID:
XP_018509753
LinkDB
All DBs
Position
A09:13174485..13184166
Genome browser
AA seq
1201 aa
AA seq
DB search
MKSCGSIRSIFMHADRVDWMLIGLGLIGAVCDGFITPTVFFITGLLLNDLGGSFSDRTFM
TAISKNAVALLYVASASWVICFLEGYCWTRTGERQAARMRQRYLKAVLRQDLPNFLMNAS
AFVGSYVVAFIMMWRLTIVGFPFIVLLVIPGLMYGRALISISRKIREEYNEAGSIAEQAI
SLVRTVYAFGSETKLVAKFSVALQGSVKLGLRQGLVKGISIGSNGISYAIWGFMTWYGTR
MVMYHGAKGGTIFAVIICITFGGISLGRGLSNLKYLSEAVVAGERITKVINRVPDIDSEN
PQGQMLEKIKGEVQFKHVKFVYPSRPETPIFDDFCLRVPSGKTVALVGGSGSGKSTVLSL
LLRFYDPVHGEILLDGVSINMLQVNWLRLQMGLVSQEPALFATSIEENILFGKEDASMEE
VVEAAKASNAHSFISQFPHGYKTQVGERGVQMSGGQKQRIAIARAIIKSPTILLLDEATS
ALDSESEKVVQEALDNASVGRTTIVIAHRLSTIRDADVICVVHDGRIVESGSHEELIENL
DGQYASLVRLQQMDNEDSDVNNNISVRVQGGQLSVLSKDLKYNPKLSTESRSNLLPNTSV
ESNLPGSVPKSKKPPLPSFKRLMAMNRPEWKHALCGCLSAALYGAVQPISAYVSGSMVSV
YFLTSHDEIKEKTRIYVLGFVGLAMFNFLFNIIQHYSFAYMGGYLTKRIREQMLSKILTF
EVNWFDEEENSTGAICSRLAKEANLVRSLVGERVSLLVQTISAVAIACTIGLVIAWRLAV
VMIAVQPIVVVCFYTQRILLKSMSQKSIKAQEESSKLAAEAVSNIRTVTAFSSQERILKL
LKTVQEGPRRESVRQSWLAGSVLATSRSLVTCTTVLNFWYGGRLIADGKIVAKAFFEIFT
VFVSTGRVIAEAGTMTTDLAKGSGAVGSVFGVLDRTTTIDPESPNGYVPDKIKGQIRFHN
VDFAYPTRPNVVIFKDLSIEIEQGKSTAIVGPSGSGKSTIIGLIERFYDPLKGSVIIDGR
DLKSYHLRSLRQHIALVSQEPALFAGTIRENIMYGGASENIEESEIIEAAKAANAHEFIT
SLSNGYETICGDRGAQLSGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSERVVQEALE
RVMVGRTSVVIAHRLSTIQNCDVIAVLDKGKVVECGNHSSLLAKGPTGAYFSLVSLQSNL
C
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttgcggaagcataagatcgatttttatgcacgcggacagggtagattggatg
ttgatagggctaggattaatcggcgccgtctgtgatggcttcatcactcctaccgtattt
ttcatcaccggcttgctactgaatgacctgggtggttcgttcagcgatcgaaccttcatg
acagccatctccaagaatgctgtagctctgctttatgtggctagtgcatcttgggtgata
tgttttcttgaaggatattgctggacaagaacaggggagagacaagcagcaagaatgaga
cagagatacttaaaagcagtgttaagacaggatttacccaactttttgatgaatgcttct
gcgtttgtcggaagctacgtggtggctttcattatgatgtggaggctcacaatcgtaggc
ttcccgttcatcgttctcctcgtgatccctggactgatgtacggacgagccctcatcagc
atctcgaggaaaatacgcgaagagtacaacgaagccggttccattgccgagcaagccatc
tcgttggtgcgaaccgtctacgcatttgggagtgagacgaagctggtagctaaattctca
gttgcgcttcaaggctcggtgaaactagggctgagacaagggctagttaaaggaatctcc
attgggagcaacggtatcagttacgccatctgggggttcatgacttggtacggaactcgg
atggttatgtaccatggcgccaaaggtggtactatcttcgcagtcatcatttgcattacc
tttggcggcatttcacttggtcgaggtttgtcgaatctcaaatatctttcggaggctgtt
gtagcaggggaaaggattaccaaagtgataaatagagttcccgatatagactcagaaaac
cctcaaggtcaaatgctagagaaaatcaaaggagaagtacagtttaagcatgtcaaattc
gtgtacccgtctagacccgagactccaatctttgatgatttctgtttgagagttccatct
ggaaaaaccgtggctctggttggtggaagcgggtcgggaaaatcaaccgtgttgtcgctt
ttgctgaggttttatgatccggttcatggagagattcttcttgatggtgtgtccattaat
atgctgcaggttaattggttgagattgcagatgggtttagttagccaagagccggcactc
ttcgccacatcaatagaggagaacatattatttggtaaagaggacgcatccatggaagag
gtggtggaagctgcaaaggcctcaaatgctcatagtttcatctctcagttccctcatgga
tacaaaactcaggttggggagagaggagtgcaaatgtcagggggacagaagcagaggata
gcaattgcacgtgcgataatcaaatcaccaacaattctccttctagatgaggcaacaagc
gcattggactcagaatccgaaaaggttgttcaagaagccttggacaatgcctctgttggc
cggacaactatcgtcattgcccaccgcctgtctactattcgtgatgctgatgttatctgt
gtagtccatgacggccgcattgtagaatctgggtcacacgaagagctcatagagaacctg
gatggtcaatatgcttctctagttcggttgcaacaaatggataatgaagactctgatgta
aacaataacatcagcgtaagggtgcaagggggtcaattatcggtattgagcaaagatttg
aagtacaatccaaaactctctactgaaagtaggtcaaacttgttaccaaatacaagcgtg
gagtcgaatcttcctggctcagttcctaagagtaagaaaccgcctctgccatcgttcaag
agattgatggcaatgaatagaccagagtggaaacatgcattgtgtggttgtttaagcgcg
gctttatatggggccgttcaaccgataagtgcatatgtttcggggtcgatggtgtcagtg
tatttcctaacgagtcacgacgagatcaaggagaaaacaaggatctacgtgttgggtttt
gttggtttagctatgtttaatttcttgttcaatatcattcaacattatagttttgcttac
atgggcggatacctaacaaaacgtatccgagaacagatgctctccaagatattgaccttt
gaagttaattggttcgatgaagaagagaactcgaccggtgcaatttgctcaagactagcc
aaagaagctaacttggtgagatcgctggttggtgaacgggtgtccttgttggtacaaact
atatcagctgtggccatagcttgcacaattggtttggtcatcgcatggcgattagcagtc
gtgatgattgctgtgcagccaattgttgtcgtatgcttctacactcaacgcattctgctc
aaaagcatgtcccaaaaatcaatcaaagcacaagaagagagcagcaaactagccgcagaa
gctgtctccaatatccgaaccgtcacagctttctcctcacaggaaaggatcttgaaatta
cttaaaacggtccaagaaggtccgcggagagaaagtgttcgccagtcatggttagcaggg
agtgtgctcgcaacttcccgaagccttgtaacatgcactacggttttgaatttctggtat
ggtggtagactaatcgctgatggaaaaatcgtggcaaaggcattctttgagatttttacg
gtgtttgtgtctaccggccgggttattgcagaggctgggaccatgacaactgatttagcc
aagggctcaggtgcggttgggtctgtgttcggagttttggatcgcaccacaaccattgat
ccggagagccccaatgggtatgtcccggataaaataaaaggccaaatcagatttcacaat
gtggactttgcttacccgacacggccaaatgtagttatattcaaggacttgtccattgag
atagaacaaggaaagtccacagctattgtcggtccaagtggttcaggtaaatcaacaata
attggcttgatcgagcggttctatgacccgttaaaaggttcagtaataattgatggccgt
gatctgaagtcttatcatttgagatcgcttcgtcaacacatagctttggttagccaagag
ccagcgttattcgcaggtactatccgagagaacataatgtacggaggagcatctgaaaac
atcgaggagtcggagattatcgaggcggcaaaggcagcaaacgctcacgagtttatcaca
tcactatcgaacggttatgagacgatctgcggagacagaggtgcgcagctatcaggtggg
caaaaacagaggattgcgatagctcgtgcggttctgaagaacccgtccgtgctgctcctc
gacgaagcgacgagcgctttggacagccagtcagagcgcgtggtacaggaggcgctcgag
cgcgtgatggtcgggaggacgagcgttgtgatcgcgcataggcttagcacgatccagaac
tgcgacgtgattgcggttttggacaaagggaaagtagtagaatgtgggaaccactcgtcc
ttgttggcaaagggtccaactggtgcttatttctcattggtcagtctccaaagtaatctc
tgttga
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integrated database retrieval system
