Brassica rapa (field mustard): 103842756
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Entry
103842756 CDS
T03449
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103842756
03041 Spliceosome [BR:
brp03041
]
103842756
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103842756
Spliceosome [BR:
brp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103842756
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103842756
NCBI-ProteinID:
XP_009117665
UniProt:
M4EQB4
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All DBs
Position
A09:41052186..41055365
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AA seq
418 aa
AA seq
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MQRLKQQQQQQAMMQQALMQQQSLYHPGLLTAPQIEPIPSGNLPPGFDPTSCRSVYVGNV
HIQVTEPLLQEVFASTGPVESCKLIRKEQSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI
KVNWAYASGQREDTSAHFNIFVGDLSPEVTDAMLFSCFSVYPSCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQTAIDEAGGKWLGTRQIRCNWATKGATSGEDKISSDSKSVVELTSGVS
EDGKDTCNGDAPENNAQYTTVYVGNLGPEVSQVDLHRHFYSLGAGVIEEVRIQRDKGFGF
VRYSTHVEAALAIQLGNTHSYLGGRQMKCSWGSKPTPPGTASNPLPPPGPAPIPGFSASD
LLAYERQLAMSKMAGMNPMMHHPQGQHALKQAAMGATGSNQAIYDGGFQNAQQLMYYQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcagagattgaagcagcagcaacagcaacaagcgatgatgcagcaagctttgatgcag
caacagtctctctaccatcccggactcctcaccgctcctcagatagaaccaatcccaagt
ggaaatcttccccctggttttgatccaacttcttgccgcagtgtgtacgttggaaacgtc
catattcaggtgacggaacctctgctccaagaggtttttgctagcactggtcctgtggaa
agctgtaagcttattaggaaagaacagtcttcctatggttttgtccactactttgaccga
agatctgctggtctggctatcctctctctcaatggaaggcatttgtttgggcaacctatc
aaagtgaactgggcttatgctagtggccagagggaggatacatcagctcactttaatata
tttgttggggatttgagcccggaggttactgatgcaatgctgtttagttgcttctctgtc
tacccaagttgctcggatgcaagggttatgtgggatcagaaaactgggcgttcaagagga
tttggttttgtttctttccgaaaccagcaggatgctcagactgcaatagatgaagcaggc
ggtaaatggcttggtaccaggcagattcgctgcaactgggcaacgaaaggagccacttct
ggtgaggacaagatcagctctgattccaaaagtgttgtggaactaaccagtggtgtctct
gaggatggcaaagatacatgtaacggtgatgctccagagaacaatgctcagtacacaact
gtctacgttgggaatcttggtccagaggtttctcaggttgatcttcaccgccacttctat
tctcttggtgctggagttattgaggaggttcgtatccaaagagacaaaggttttggattt
gtaagatactctactcatgtagaggccgccctcgctatccagctggggaacacacattcc
tacctcggtggcaggcagatgaagtgttcttggggaagcaagccaactccaccaggaaca
gcatcgaacccgcttcctccaccaggtcccgcaccaatccctggattctcagccagcgac
ctcttggcttacgagaggcaactagccatgagcaagatggctggaatgaatccgatgatg
catcacccgcagggacaacacgctctcaagcaagctgcgatgggggccactggttcaaac
caggccatctatgacggtggttttcagaacgcgcagcagctcatgtattaccagtga
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