Brassica rapa (field mustard): 103843415
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Entry
103843415 CDS
T03449
Name
(RefSeq) DNA ligase 1
Organism
brp
Brassica rapa (field mustard)
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
103843415
NCBI-ProteinID:
XP_009118391
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Position
A09:43572567..43576825
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AA seq
803 aa
AA seq
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MLAIRSSNHFRCISSLCTKTRFSSVLVSLNRQVSPFPSSSRLHHRAMSSSRPSAFDALMS
NARASAKKKTTPQASNSSPSPNKRKISKTQDADSPKAEAFSDSPKPRSDSPSIAEDLKKG
AKTQDADLTKVEAFSDSAKPRSSIAKKSRTLSQTDKVDELKSRIVLLKRKPGEFDPERVA
CWEKGERVPFLFVALAFDLVSAESGRIVITDILCNMLRTVIATTPDDLVAAVYLAANEIA
PAHEGVELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPL
TVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTV
LAALGQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKT
CNFTLGVPIGPMLAKPTKGVGEIINKFQDTVFTCEYKYDGERAQIHCMEDGTFEIYSRNA
ERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDI
KVGVCIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDPGYFQFATALTSSDIDEIQKFL
DASVDIGCEGLIIKTMNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKR
TGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLN
PDVWFEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSE
QIADMYQAQKHNHPSNEGKGEDD
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgattcgatcatcgaatcacttccgatgcatttcttctctctgcactaaaact
cgattctcctccgtattagtctctctcaatcgccaagtttccccctttccctcctcctcg
cgcctccaccacagagcaatgtcttcttctcgcccctctgcattcgacgctctcatgtcc
aacgctcgcgcttccgccaagaagaaaacgactccccaagcttccaattcatctccctcc
ccgaacaaaagaaaaatctcgaaaacccaagacgccgattcgccaaaggcggaagctttt
tccgattcccccaaacccagatcagattcgccgtcaattgcggaagatttgaagaaggga
gcgaaaacccaagacgccgatttgacaaaggtggaggctttttccgattcggctaaaccc
agatcgtcaattgcgaaaaagtctaggactttgagtcagacggataaagtcgacgaattg
aagagtaggattgtgttgctgaagaggaagcctggcgaattcgatccggagagagtggcg
tgttgggagaaaggggagagagttccgtttttgtttgtggcattggcgtttgatttggta
tcagctgagagtgggaggattgtgattactgatattttgtgtaacatgttgaggactgtt
attgccaccactcctgatgatttggtcgctgctgtttatcttgcggcgaatgagattgct
cctgctcatgaaggggtggagttggggattggtgaaggttctattattaaggccatctct
gaagcttttggtagaactgaggcgcaggttaagaagctgaatacggaactgggagacttg
gggcttgtagcaaaaggaagccgttcgtctcagactatgatgttcaagccagaaccattg
actgttgtcaaggttttcaatacttttcgacaaattgctaaggaaagtgggaaagatagt
acagaaaagaagaaggatcggatgaaggcacttcttgtggcagctacagactgtgaacct
ctctacttaactcgtttacttcaggcaaaattgcggttagggttctcaaatcagactgtc
ttagctgccttgggacaagcagctgtttataatgaagaacactcaaagccacccccaaaa
accaagtctcctttagaggaggctgcgaagattgttaagcaagtattcactgtgcttcct
gtgtatgacattatagttcctgctcttctaactggtggtgtgtggaatcttcctaaaact
tgtaacttcacacttggtgttcctattggaccaatgcttgcaaaaccaacaaaaggtgta
ggcgagataattaataaattccaggacacagttttcacatgcgaatacaaatatgatgga
gaacgtgcacagatacattgtatggaggatggtacattcgagatatatagtcgaaatgct
gaaaggaacactggaaagtaccctgatgttgctcttgcgttatcaaggttaaagaagccc
tctgtgaaatcttttatcctggattgtgaggttgttgctttcgatagagagaaaaagaag
attcttccgtttcagattctgagcactcgagcgcgtaagaatgtgaacgtcaatgatatc
aaagttggcgtatgcatctttgcttttgacatgttatatctaaatggacagcaacttatc
caggaaaatcttgatattcgccgagagaagctgtacggatcatttgaggaagatcctgga
tatttccagtttgcaactgctctaacatccagcgatatcgatgaaatacaaaagtttctt
gacgcttctgttgacattgggtgtgaagggttaatcattaaaacaatgaattcagatgcg
acatatgagcctgcaaagcgatcgaataattggttaaaactgaagaaagactatatggac
agcattggggattctgtggatcttgtaccaattgctgctttccatggacgtggcaaacgc
acaggtgtctttggtgcattcttactagcttgctatgatgctgataaggaagagttccag
agcatttgtaaaataggtactggattttctgaagctgtgcttgaagaacggtctacgagt
cttcggtccagagtgattcctactcctaaacaatactaccgagttggagacagtctcaat
ccagatgtttggtttgagcccactgaggtctgggaagtgaaggcagctgacttgacaatt
agccctgtgcatcgtgcagccaatggaattgtggatcctgataagggaatttctctacgt
tttcctcgtttactccgtgtacgggaagacaagaagccagaggaagcaacatcatctgaa
cagattgctgatatgtaccaagctcaaaaacacaaccatccaagcaatgaaggcaaaggt
gaagatgattga
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