Brassica rapa (field mustard): 103845914
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Entry
103845914 CDS
T03449
Name
(RefSeq) ABC transporter B family member 5
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103845914
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brp02000
]
103845914
04147 Exosome [BR:
brp04147
]
103845914
04090 CD molecules [BR:
brp04090
]
103845914
Enzymes [BR:
brp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103845914
Transporters [BR:
brp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103845914
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103845914
CD molecules [BR:
brp04090
]
Proteins
103845914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
RsgA_GTPase
AAA_16
AAA_15
Zeta_toxin
AAA_21
AAA_30
AAA_25
SbcC_Walker_B
nSTAND1
DUF815
Motif
Other DBs
NCBI-GeneID:
103845914
NCBI-ProteinID:
XP_009121075
LinkDB
All DBs
Position
A07:2367478..2374212
Genome browser
AA seq
1249 aa
AA seq
DB search
MVDVSRFETSHVHSRSPTQLEMKKGIIEEKAKTVPFYKLFSFSDSTDVLLMIVGSIGAIG
NGLGFPLMTLLFGDLIDTVGRRNLFTNDIVELISKICLKFVYLGLGTFVAAFLQVSCWVI
TGERQAARIRSLYLKTILRQDIVFFDVETNTGEVVGRMSGDTVLILDAMGEKVGKFIQLF
VTFLGGYALAFVKGWLLTLVMLTSIPLLAMAGAAMSLIFTKASSQQQAAYAKASTIVEQT
CGSIRTVASFTGEKQATSSYKELINSAYKSSVKQGLSNGLGFGVMFLVFFCSYALAIWFG
GEMILRKGYTGGAVINVMIIVVASSMSIGQAAPCLTSFAAGQAAAYKMFETIKRKPVIDS
LDLNGKVLEDIQGEIELRDVCFSYPARPREEVFGGFSLMIPSGKTTALVGESGSGKSTVI
SLIERFYDPSSGQVLIDGVDLKEFQLKWIRGKIGLVGQEPVLFSSSIMENIGYGKEGARV
QEIEAAAKLANAAKFIDKLPRGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEA
TSALDAESERVVQQALDRVMVNRTTLIVAHRLSTVRNADMIAVLHRGKIVEEGSHLELLK
DHEGAYSQLIRLQEINTESRRLEISNGSIRNESSRGNGVSRMHNDDESVSVAGQENTEKP
KEMPQDVSITRIAALNKPEAPILILGTLVCALDGAIFPIFGLLFAKVIIAFFQPPHELRS
DSRFWSIIFVLLGVLSLVVYPIHMSLFAVAGGRLIRRIRSMCFEKVVHMEVGWFDEPENS
SGAMGARLSADAALIRTLVGDSLALTVKNVASAVAGIIIAFAISWELAVIILVMIPLTGI
NNYVQVKFMKGFSADAKTKYEEASQVANDAVGSIRTVASFCAEEKVIEMYKKRCEDSIKS
GTKQGVVAGLGFGLSFFVLYSVYAACFYAGARLVKDGRTTYNGVFQVFLALTMTTIGISA
ASSFAPDSSKAKSAAASVFGIIDRKSKIDSRDESGMVLENVKGDIDFCHIEFAYQTRPDI
QIFRDLCFSIRAGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGVELKKLQLKWLR
KQMGLVGQEPVLFNDTIRANIAYGKGGEEATEAEIVAASELCNAHKFISSIQQGYDTVVG
ERGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDQVMVNRTTIVV
AHRLSTIKNADVIAVVKNGVIAEKGTHETLMNIEGGVYASLVQLHMSAF
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatgtatctagatttgaaacaagtcatgttcattcaagaagtcccacacagttg
gagatgaagaaggggataatcgaagagaaggcaaagacggtaccattctacaaactgttt
tctttctcagattctaccgatgtgttgttgatgatcgttggttcgatcggagctatcgga
aacggtcttggttttccgttgatgacattattgtttggtgatcttattgatacggttggt
cgtcgaaacctattcacaaacgacattgttgagttaatctccaagatttgtttgaaattt
gtctaccttggacttgggacatttgtagcagcctttcttcaggtgtcttgctgggtgatt
acgggagaaagacaagctgcaaggataaggagtttatatctgaagacaattctaagacaa
gacattgtattcttcgatgtcgaaacaaacacaggagaagttgttggtcgtatgtcaggt
gatactgttcttatactagatgctatgggtgagaaggttgggaaatttatacagttgttt
gtaacattcttgggtggatatgcattagcgtttgtgaaaggatggttacttacacttgtt
atgttaacctcaattcctcttctagctatggctggtgcagctatgtcgcttattttcact
aaagcttcttctcaacaacaagctgcttatgccaaagcatcaactattgttgaacaaact
tgcgggtctattcgaaccgttgcttcattcacgggagagaagcaggcgactagtagctac
aaagagttgataaactcggcctataaatcgagtgtcaagcaaggtctctctaatggttta
gggtttggagtaatgttcttggtgttcttttgtagctatgctttggctatatggtttggt
ggagagatgatactcagaaaagggtatacaggtggtgcagtgattaatgtaatgatcatt
gtggtcgcgagttcgatgtctatagggcaagcagcgccatgtctaacctcatttgcagct
ggtcaagctgcagcttataaaatgtttgaaacaataaaaagaaagccagtgattgattct
ttagatctaaacgggaaggttttagaagatatacaaggcgaaatagagctgagagatgtg
tgttttagttaccctgcaaggcctagagaagaggtctttggaggattctctctgatgatc
ccaagtggcaaaactactgctttggtaggagaaagcggcagcgggaaatctactgtgatc
agtttaatagaaaggttctatgatccgagttccgggcaagtgcttattgatggtgttgac
ttgaaggagtttcagctgaaatggattcgaggaaagattggattggttggtcaagaaccg
gttctcttttcttcaagtataatggagaatattgggtacgggaaagagggagcaagagtc
caagagatagaagcagctgcaaagctagcaaacgcagccaagtttatcgataagttgcct
cggggtttggatacaatggtaggtgaacatggaactcagctctcaggaggacagaaacag
cggatcgcaatcgctagggccatacttaaagatccaaggattttgctgctagatgaagcg
acaagcgctcttgatgcagaatccgaacgagtggttcaacaagctttagatagggtgatg
gttaaccggactactttgattgtcgcacatcggttaagcacagtgagaaatgctgatatg
attgctgttcttcaccgtggaaagatagttgaagaaggttcacatttggagttactcaag
gatcatgaaggggcttattcacaacttatacggctacaagagataaacacagaatcaaga
cgattagagatttcaaatggatctatcaggaatgaatcatcaagaggaaatggtgtcagt
aggatgcataatgatgatgaatctgtttctgttgcaggacaagaaaacactgaaaagcct
aaagaaatgccccaagatgtgtcgattactcgaattgctgctcttaacaaaccggaggct
cccattctcatacttggaaccttagtatgtgcacttgatggcgctatattcccaatcttc
ggactcctctttgctaaagttatcatagctttcttccaaccacctcatgagctgaggagc
gattcgagattctggtcgataatatttgtgcttcttggtgtactctctttggtagtgtat
ccaatacatatgtccttgtttgccgtagctggagggagactgattcgtaggataagatca
atgtgttttgagaaagttgttcacatggaggttgggtggtttgatgagcccgagaactcg
agtggtgccatgggagcaaggctctctgctgatgcagccttgatcaggacacttgtgggc
gactctttggctctaactgtcaagaacgttgcatccgcagtggcgggaataatcatagct
tttgcgattagctgggagttagctgttattatcttagtaatgattcctttaacaggaatc
aataattacgttcaggttaagttcatgaaaggcttcagtgcagacgcaaagacaaagtac
gaggaggcgagtcaagtagcgaacgatgcggttgggagtataagaacggttgcatctttc
tgtgcggaggagaaagtgatagagatgtataagaaacgatgtgaagattcgatcaaatcg
ggaacgaagcaaggagtagtcgcaggattggggtttggtctctccttcttcgttctttac
tctgtctatgctgcttgtttctacgcaggtgctagattggttaaagacggaaggacaacc
tacaacggtgtttttcaggttttcttagcattgacgatgacaacaattgggatttctgcg
gcgagttctttcgctcctgattcaagcaaagctaagagtgctgctgcttcagttttcgga
atcattgataggaaatcgaagatagactcgagagatgaatcagggatggtgttggagaat
gtaaagggagatatcgatttttgtcacatagagtttgcttaccaaactagacctgatatt
cagatatttcgtgatctttgtttctccattcgtgccggaaagactgttgctttggtcgga
gaaagtggatcaggtaaatctacggtgatatctctgttacagaggttttacgatccagat
tcgggtcatatcactttagacggagttgagctcaagaagctgcaactgaaatggctgaga
aaacaaatggggcttgtggggcaagagcctgtactgttcaacgacacaatacgagccaac
attgcttatggaaagggaggagaagaagcaaccgaggctgagatcgtagctgcttccgag
ctctgtaatgctcataaattcatctctagtatacaacagggttacgatacggtggtcggg
gagagagggatacagttatcaggaggacagaagcagcgcgtggcaattgcacgtgccatc
gtgaaagaaccgaagatcttgttactggacgaagcgacgagcgcgttggacgcagaatca
gagcgtgtggttcaggacgcacttgaccaggtgatggtgaaccggaccaccatcgtggtg
gctcacaggctttcgacgatcaagaatgctgacgtcatcgccgtagtgaagaacggtgtg
atcgcggagaaagggacgcacgagacgttgatgaatatcgaaggtggtgtttatgcttcc
ctcgttcaacttcacatgagtgctttctaa
DBGET
integrated database retrieval system
