Brassica rapa (field mustard): 103846338
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Entry
103846338 CDS
T03449
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103846338
Membrane trafficking [BR:
brp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
103846338
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
103846338
NCBI-ProteinID:
XP_033138485
LinkDB
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Position
A10:16206132..16214021
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AA seq
1274 aa
AA seq
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MVEAVNSSLGKMLLEEVSPVVMVLCTPLVEETFLKNGLSFVETLKPFCNFSNIDVPVRTS
GDQLYRLKKFTLRLFNASDIKQPNVEVAKQRLEHVITQAGEKVFHDLESDPPQITDILSN
PESEIAPTWFQYYNKELIRTLSFSDHEAFDHPVACLLVASSKDEEPLNKFVDLFNTNRLP
SLLNDGVMDPKILKHFLLVHDNQDATTERTSKVLSEMRSTFGNNECNLLCTNSSKEGNVE
HQANPWASFKSSVPAETLGCALTGDDIGEIKDLMQEFASRHIIPYMEQKVRDLNQQISAT
RKGLRNQIKNLWWRKGKDDVPDSTKGSIYTFSSTESQIRILGDYAFMLHDYELALSSYRL
ISTDYKLDKAWKHYAGVQEMMGLAYFISDQSIKEAEYCMENAFSTYMKLGKSGFQNATRC
GLWWAEMLKARDQYKEAASVYFRICGEEPLHAAVMLEQASYCFVLTKPAMLHKYGFHLVL
SGDHYKICDQVNHAIRTYRSAISVYESTTWSHIKDHVYFHIGQWYAIVGMNDVAVRNMLR
VLDCGNQSKSTQEIFLRDFFDIVKKTGMKHEVVGLRLPVINMSSLQVIYEDHRTYASQAS
ALVEESIWQSLEDDIIPSLNSGKSNWLELQSKLLPKKYKESNVCVVGESVKLDLEFRNPL
LISTSVTSVSLICELTANSDDLKLVDKEPSSLSLETEHNQVTTSGLSSFTLSEVDFTLGG
GEKKLVRLTVTPSEEGILKIVGVRWELSGSIVGVHYFQSVPTKAKTNKAKRKNKLTPTDA
LKFLVIKSLPRLEGSIDHLPDKLYAGDLRYLVLELKNNSESPIKNLKMKISHPRFVNPES
HEEELTPGFPDCLKKGPEQNTVQRETSRTSVFAFPKDVSLQGDRSLRWPLWLRAAIPGTM
SLYFTIYYEMENVSSIMKYRTLRMHYSLQVLPSLETSFEITPSPSRLQEFLVRMDIVNRA
NSDAFEIHQLSTVGCRWGISLLQPVDTILPSKSILPGQGLSCFFMIKDCRKPGIEEEKTT
SILPSQTDTKLITQDDDEKFFDIVNSPLASFHESERSCHGTSDQLSPNTVDFILISRLAK
SSNPSAEQDLLKILSHHSCHNRIRSSIPLSWSLDGPKTMYHDFSTSFCEIKLKMVIRNTS
DGFLSVSINTIDGLPDAAAPTPSSGNLSGWRYVPAITEEMKLTSDVMGSRLGKPPPSMES
SPPFIWSGSSSTKVQIQPLSTTEIPLQVSVFSPGTYSLSTYELVWELFEHENASSATSGT
CQGYPYYITVLQSE
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggcggtgaactcttcgcttgggaaaatgctattggaggaggttagtccagtg
gtcatggttctctgcacgcctctcgttgaagagacgttcctcaagaatggactatccttt
gtggaaacgcttaagccgttctgcaactttagtaacatcgatgttcctgttcggacctca
ggcgatcagctttatcggctaaagaagtttacgctgagattgtttaatgcatctgatatc
aaacaaccaaacgtagaggttgcaaagcaacggctagaacatgttatcactcaagctggg
gagaaggtttttcacgatttggaatctgatcctcctcaaattactgatatactctctaat
ccagagtctgaaattgcacccacatggtttcagtattacaataaagaacttatccgcacc
ttgtccttttcagaccatgaagcttttgatcatcctgtggcttgtctcttggtcgcttca
tcaaaagacgaagaacctttaaataaatttgtagatcttttcaacaccaatagattacct
tctctgcttaatgatggtgtaatggacccaaagattctgaagcatttcctattggtgcat
gacaatcaagatgcaacaacagagagaacgtctaaagttctgtctgagatgagaagtaca
tttggaaacaatgaatgcaacttactttgcactaattcatctaaagaggggaacgtagaa
caccaggctaatccatgggcttcatttaaatcaagtgtcccggctgaaacacttggatgt
gctcttactggcgacgatattggggagatcaaagatctgatgcaagagtttgcttccagg
catataattccatacatggagcagaaagtccgagatcttaatcaacagatttctgcaaca
aggaaaggacttagaaatcagataaagaacttatggtggagaaaaggaaaagacgatgtt
ccggattcgaccaaaggttctatttatacctttagctccaccgaatctcaaatcagaatt
ttgggtgactacgccttcatgttgcatgactatgaacttgcattgtcaagctaccgctta
atatcaacagattacaagctcgataaagcttggaagcactatgctggtgtccaggaaatg
atgggactcgcatatttcatctcagaccagtcaataaaggaagctgagtactgcatggaa
aatgcattcagcacttatatgaaacttgggaagtctggctttcaaaatgctacgagatgt
gggctatggtgggcagagatgttaaaggctagagaccagtacaaagaagcggcttctgtt
tacttccgcatatgtggagaggaaccattgcacgctgcagtcatgttagagcaagcttct
tactgcttcgtgttaactaagccagcgatgctacacaagtatggatttcatctagttctc
tcaggagaccactataaaatctgtgatcaggttaaccatgcaattcgtacatatagaagt
gcgatctctgtttatgaatcaactacttggagccatatcaaagaccatgtttactttcat
attggacagtggtatgcaattgtcgggatgaatgatgttgcagttagaaacatgctcaga
gtactggattgtggaaaccagtccaagtctacccaagagatttttctcagggactttttc
gacatagttaagaaaactgggatgaagcatgaggtggtgggacttcgactaccagttatt
aatatgtcgtctcttcaagttatatatgaagaccatcgcacttatgcatctcaagcttct
gctcttgtagaagagagcatctggcaatcattggaggatgatatcattccatcgttaaac
tctggcaagtcaaactggctggagttacagtcaaagctactgcctaagaagtacaaggaa
tcaaatgtttgtgtcgttggagagtcggtgaaattggatctggagtttaggaatccactg
ctaatctctacttccgttacaagcgtttctctcatctgtgaacttacagcaaattctgat
gacttaaaattggtagataaagagccaagtagcttaagcttggagactgaacacaatcag
gttacaacctctggtttatcttctttcaccttgtctgaagtggacttcacattaggcgga
ggcgagaaaaagttggtgaggctaacggttacccccagtgaagaaggtatcctcaaaatt
gtcggtgtaaggtgggaattgtctggctccattgtaggcgtgcattacttccaatctgtg
cctacaaaagcaaaaactaacaaagcaaaaaggaaaaacaaacttactcccactgatgcc
ttaaaatttttggtcatcaagagtctacccaggcttgagggttcaattgatcatctgccg
gacaaattgtatgctggagatcttcgttatcttgttttagagttaaaaaataattcagaa
tctccaataaagaatcttaaaatgaagattagccatccaagatttgtaaatcctgaaagt
catgaagaagagctgacacccggatttccagattgcttaaagaagggtcctgaacaaaat
actgtccagcgtgaaacaagtagaactagtgtatttgcatttccaaaggatgtatcacta
caaggagaccgatctttgaggtggcctctttggcttcgagctgccatccctggaacgatg
tctttgtatttcacaatatactatgagatggaaaatgtatcaagcatcatgaaatatcgc
accctaaggatgcattatagtttacaggttttaccatctctagagacctcgtttgaaatc
accccctctccatcaagattgcaagaatttcttgtgcgtatggatatcgtgaaccgtgcg
aattcagatgctttcgaaattcatcagttgtcaacagttgggtgtcggtggggtatctcg
ttgcttcagcctgttgatacaatcttgccttccaagtctatactccctgggcaaggttta
tcatgtttcttcatgattaaggattgcagaaaacccgggattgaagaagagaaaaccacg
tctattcttcccagccaaaccgacacaaaactgattactcaggatgacgatgaaaagttt
tttgatatcgttaactcacctttagcaagcttccatgaaagtgaaaggtcatgtcacgga
acctcagatcagttaagtccgaataccgttgacttcattctaatctcgcgcctagcaaaa
tctagcaatccatcagcagagcaagatttactgaagattctgtctcaccattcatgtcac
aatagaataaggagctcaatcccgctctcatggtcactagacggtccgaagaccatgtac
cacgatttctcgacctccttttgtgaaattaaactaaagatggtaatcagaaacacatct
gatggatttttatctgtgagcatcaacaccattgatggcctaccggatgcagcagcacca
actccttcctctggaaacctgtccgggtggcgctacgtgccagccataacagaggaaatg
aaactaacttcagacgtcatgggaagccgcctgggaaaaccaccaccttccatggaaagc
tcgcctcctttcatatggtcaggttcaagttccacaaaggtccagatccagccattgtcc
acaaccgagatccccctgcaggtatcggttttctctccaggtacctacagtctctctaca
tatgaacttgtctgggagcttttcgagcatgaaaacgcgtcatcagcaacatcagggaca
tgccaaggctatccttattacattactgttcttcagtctgagtga
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