Brassica rapa (field mustard): 103851087
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Entry
103851087 CDS
T03449
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Module
brp_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103851087
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103851087
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
103851087
NCBI-ProteinID:
XP_009126168
UniProt:
M4E497
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Position
A02:complement(3250424..3253437)
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AA seq
428 aa
AA seq
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MNKSLLFFVFLCLLIQISKLGFCLERKAHNGNNGLKRHGFISVTSFGAVGDGKADDTKAF
LKAWKAVCKGGSRGKTNFVVPLGKTFMLKPLTFEGPCKSSSITFLIRGNLVAPGYTWHAG
NYPAWISFDSIYGLAITGGGTINGRGSVWWRNVQHRPTAMHFNNCNGLHISNLHHLNSPR
NHISLSCSENISLSGLNMTAPGDSPNTDGIDISNCRGVDIRDSVIATGDDCIAINGGSSY
INITGIFCGPGHGISVGSLGQNGHFSAVEEVRVKNCTLSNTKNGVRIKTFQNGLGFARKI
SFEDIKMVASENPIIIEQNYHDQGKNGDVSFEYSNHQSCHVNRLYQTESGSGNGRGVRVS
DVRYSRIQGSSASSEAITMNCDANLGCVDIVMDHVNIVSAKSGHKVSASCKNVHGKYFDS
VISCQKKH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctttgttgttcttcgtctttttatgcttgcttattcaaataagcaaatta
ggtttctgcttagaaagaaaagctcataatggtaataatggactgaaacgccatggattc
ataagtgtcactagcttcggagctgttggcgatgggaaggctgatgatactaaggcattt
cttaaggcgtggaaagctgtatgtaagggaggaagtagagggaagacaaattttgtagtg
cctctaggaaaaacgttcatgcttaagcctcttacattcgaaggtccctgcaagtcttcc
tccatcacctttttgataagaggcaatcttgttgcgccgggttacacttggcatgcggga
aactaccctgcatggataagttttgatagtatatacggcctagctatcaccggaggcggc
accatcaacggccgtggttctgtgtggtggagaaacgttcagcatcgtcccacagcaatg
catttcaacaactgtaatggtcttcacatctctaatctccatcacttgaacagtcctcgt
aaccacataagtctaagctgctcagagaacatcagcctctcgggtctaaacatgactgcg
cctggtgatagtcctaatacggatggtatagacatatcaaactgtagaggagtcgacata
cgtgactctgtgattgccactggggatgactgcattgccattaacggaggttcatcttat
atcaacataaccggcattttttgcggccccggtcatggcatcagcgtaggaagccttgga
caaaatggacatttttcagccgttgaagaggtgagagtaaagaactgtactttgtcaaac
acaaagaacggtgtccggatcaagacattccagaatggattaggattcgctcggaaaatc
tcatttgaggatattaaaatggtggcttcagagaaccctataatcatcgaacagaactac
cacgaccagggcaagaacggagacgtaagctttgaatacagtaaccaccaaagctgtcat
gtaaatcgcttgtaccagaccgagtctggttctggcaatggcagaggcgtgagagtgagc
gatgtgcgttacagtagaatacaaggttcatccgcgagtagtgaagccatcacaatgaac
tgcgatgcgaacttgggatgtgtggatattgtgatggaccatgtgaatatcgtttcggct
aaatcaggtcacaaggtgtctgcttcttgcaagaatgttcatgggaagtactttgattcc
gttattagctgtcagaaaaagcattag
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