Brassica rapa (field mustard): 103857211
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Entry
103857211 CDS
T03449
Name
(RefSeq) titin homolog
Organism
brp
Brassica rapa (field mustard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INCENP_ARK-bind
Motif
Other DBs
NCBI-GeneID:
103857211
NCBI-ProteinID:
XP_009132639
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All DBs
Position
A03:complement(5759713..5767140)
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AA seq
1811 aa
AA seq
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MFSGRENPTANLVNRQNLFVQIFERKRRIVEKVKQQVDLFDDHLASKCLLAGVSPPSWLW
PPSIPSETSELNKEEIISGLLFPQSRPSFICPSGRLFPYQPPVSFLADSVGRQDLTSVVN
NTLEEQLFEEEQQHHHLSHNFVRRVSDHSHEQGDGTAFPRDVHEEEPLPEGVSIGCRENE
SCPSRGHSQNQRVVNSLGATSPGRSQGKMVPESVSTTGCERKLSTLGYCQHETEPDTCFD
PGLPVPLEKIQRSKSRQKDFERRSSAKASRSRSNYRNELKPSPGGNIGPEIASLRSDSVR
ETNLFEHDENDEGCPDEVEDRNSQGKGGDQCIKFSLSTESSTPHQKVVPLQRATSGDASA
SIVPKSLSEAGHVNEMDVLQTIETIAEVSVKVDEQLDDPHSRSCNETAYLDGGTRSKSSS
HDRSKREHQKSSNSVSGSISSRNSDPSHRADDGVELPQVIPLTNEDSRLTDAGARLFQSE
IKTRSSSNARRNKSKTGHSGSVKSSSVDLEPIHSISSLQGGDAKESLIPSTIDVEGLVVV
NITSDDQAKEKGEGVKESLVPSIVDVEGGNSGGIRSKTEHSGSLESSSVDVEPRHSGSLL
QGREVKESPIPSSIDVERLVNEDMTSNDQSKEKGECVKESMIPSTIDIEGLAVEDITRGN
QLKGKGKCVDTNICSSAGRISQTGVSTDETTLASAIENSIPKTELLGFVDSSSAELQWRH
SVMQSDDESVLLKPVTDTGEALLMEEDKAGESTEVSGISKSRSLSQTDITVVEQVVVESI
LQESGTPEDMTDHSKKWDTGCVSKEEQSQGSLTKAGSNQCHGIVSRPRSLATEEKSANEY
NDLSIDSDRKSTEEQLKVRAGNASVRTHDLPDFMKPESHCFDDTGERSFDDIPMNSREKT
TMEKVLTPASAARMSDVPSLTDSEVNLSADNEMHDTEDHNGLEKETESPTSHCGVRVGEN
EPPESNTSAGQIDALKKRPQLGISSDQGVSQFNRNIACTETCESHGLEGSIQNLFCSSSL
MEGSQLQNKRRRTLYKVTSREPSSNPVGDILDSDSVRETVHHSEEAASHNLNQYDVELQK
IIGSASSDHYEVELQKMIGSASSAELRFGEDYLFKEAGLMSPASLSFRPEQSVDRSLTAP
NQGLITENMDFLPFAGETSHPFASGVVRSSDCSPCLSPLGLTGADDGSPPVLEGFIVQTD
DESQSGSKNQIKHDSFEFPKTTAESATIIEQIRKSACRITPSLNPAKIFKFNEKLDLDQS
VSTELFDGMFFSQNLEGSSVFDNLGVNNDYTGNLYTSCLPFSGAGSSADARNLLTSPNGK
LWYRSLQKSASSEKQGIQTPDLPCISEENENVDEEPENLCANTPKSMRSANRRSSIPDLP
CIAEENEKEDEILEAVSQVSDGSKSGNASAEKKPLADVDEEDPMKFLPSVSNVKIPVDRQ
SLDSVNTAFSFSATCNNSVKSKPERKMGGSRRFTGKGKENQGGAGAGRNVRPPSSRFSKT
KLSCNSSLTSVGPRLPDKEPRHNNIVSNITSFVPLVQQQKAAAAIITGKRDVKVKALEAA
EASKRMAEQKENERKMKKEAMKLERARLEQENLRKQEIERKKKEEERKKKEAEIAWKQEM
EKKKKEEERKRKEFEMADKKRQREEDKKLKEAKRQRVAEMQRQQKEADEKLQAEKELKRK
AMDAKIKALKELKEEQGNARIREARPKSNSSDDTNASRSSREDDLKVISNIGKMSEESYD
ISPYKCSDDEDEEEDDDDDMSNHKFVPSWASKSNVLLGVISQENRDPDVAFPAKRFRSIT
KVLLPRKFRSQ
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgttttccggcagagagaatccgacggcgaatttagtaaataggcagaatcttttcgtt
cagatcttcgagaggaagaggcgaatcgtcgagaaggtcaagcaacaagtagatcttttt
gacgaccatttagcctccaagtgcctactcgccggagtctcccctccgtcgtggctctgg
cctccgtctataccttccgaaacttccgagttgaataaggaggagatcatctcaggactc
ctctttcctcaatcaagaccttccttcatttgtcctagcggccgtctctttccgtatcag
ccgcccgtcagttttctagctgacagtgtaggaagacaggacctgacgtctgtggtaaac
aacactttggaagagcagttgtttgaagaagaacaacaacaccaccacctctcacacaac
ttcgtcagacgcgtttcagatcattctcacgaacagggtgatggtactgcatttcctaga
gatgtccatgaggaggaaccattgccagaaggtgtctcaattggttgcagagagaatgaa
agctgtccgtctcgtggacacagtcagaatcagagagttgtaaatagccttggtgctaca
tctcctggacgtagccaaggaaaaatggttcctgaaagtgtctcaactactggttgtgag
cggaaactatcaactctcggatattgtcaacatgaaactgaaccagacacttgctttgac
cctggactaccagtaccgcttgagaagattcagagatcgaagtcacgtcaaaaagatttc
gagcgtcggagtagtgccaaagcttccagaagccgttcaaactatagaaatgagctcaaa
ccttctccaggtggaaatataggccctgagattgcttcgttaaggtccgacagtgttagg
gaaacaaatttatttgagcatgatgagaatgatgaaggttgtcccgatgaagtagaggac
cgcaattctcaaggtaaaggaggggatcagtgtattaagtttagcttatctacagagtct
tcaaccccacatcagaaagtggttcctttgcaaagagctaccagtggagatgcttctgct
tctattgtaccaaaatctctaagcgaggctggtcatgtgaatgaaatggatgtactacag
accattgagacaattgctgaagtgtctgttaaagtagatgagcaactggatgatccccac
agcagaagttgcaatgaaacagcttatctcgatgggggtacaagatctaaaagctcaagc
catgatagatccaagagggaacatcaaaagtctagcaactctgtttcgggtagcatctcg
tcaagaaattcagatccctctcacagggcagatgatggagtagaattaccccaggtaata
cctctcactaatgaagattctaggctgacagatgctggagcgagactctttcagtctgaa
attaaaacaagatccagcagcaatgcacggagaaataaatccaagactgggcattcaggc
tctgttaagtcttcttcagttgacctggagccaatacattcgatttcatcactgcaaggt
ggagatgcaaaggagtcactgattccctcgactattgatgttgaaggcttggtagttgta
aatattaccagcgacgatcaagcaaaagaaaagggtgaaggtgtaaaagagtcactggtt
ccctctatagtcgatgttgaaggtggtaattctggaggaattagatctaagaccgagcat
tcaggctctcttgagtcttcttcagttgacgtggaaccaagacattcaggttcattactg
caaggccgagaagtaaaggaatcgcccattccctcttctattgatgttgaaagattagta
aatgaagatatgaccagcaatgatcaatcaaaagaaaagggtgaatgtgtaaaggagtca
atgattccctcgactattgatattgaaggtttagcagtggaagatatcaccaggggcaat
caattaaaaggaaagggtaaatgtgttgacactaacatatgttcaagtgctggaaggatc
agccaaactggcgtatccacagatgagacgacacttgcgagtgcaattgaaaactctata
cccaagaccgagcttttgggatttgttgattcctcttcagctgaactgcagtggagacac
tcagtaatgcaatcagacgatgaaagtgtattgttgaagcccgttactgatactggtgaa
gctttattaatggaggaagataaggctggggaatcaactgaagttagcggtatctcaaaa
tctagaagtttaagccaaactgacatcacggtagttgagcaagtggtggttgaatctatt
cttcaagaaagtggtaccccagaagacatgactgaccattctaaaaaatgggatactggt
tgtgtgtccaaggaagagcagtcacagggttcattgaccaaagcagggagtaaccagtgc
catgggatagtaagtaggccaagaagcttagcaactgaagagaaatcagcaaatgaatat
aatgatctttctattgactctgatcgtaaatcaactgaggaacagcttaaagttagagca
ggaaacgcatcagtgagaacgcatgatctccctgactttatgaagcctgaatcacactgt
tttgatgatactggagaacgcagcttcgatgacattccaatgaacagtcgagaaaaaact
acaatggagaaggtcctaacaccagcatctgctgcaaggatgtcagatgttccatctctc
actgattctgaggtaaatctttcggcagacaacgaaatgcacgacactgaagatcataat
ggcttagagaaagaaacggaatcgcctacaagccattgtggcgtaagagtgggagaaaat
gaacctccagagtcaaatacatccgctggtcagatagatgcattgaaaaagagacctcaa
cttggaatatcctcggaccaaggtgtttcccagtttaatagaaatatagcatgcacagaa
acatgtgaatctcatggtctagagggctctatacagaatcttttctgctctagctccctt
atggagggttcacaactgcagaataagcggagaagaaccctgtacaaagtaactagtaga
gagccttcgtcaaacccagtgggagacattctggactcagattctgttagggaaacagta
catcatagtgaggaagccgcaagtcacaacctcaatcaatacgatgtagagttgcaaaag
ataattggatctgcatcttcagatcattatgaagttgagttacaaaagatgattggatct
gcatcgtcggctgagttacgatttggagaggattacttattcaaggaagctggattgatg
agtcctgcctcgctttccttcagaccagaacagagtgtagacaggagtcttactgctcca
aatcagggacttataacagaaaatatggactttctgccatttgctggagaaacctctcac
ccatttgctagtggcgttgtacgtagttcagattgttctccttgtttgtcacccttgggt
ttgacaggcgcagacgatggaagcccccctgttttggagggctttatagtccaaacggat
gatgaaagtcaaagcggttccaaaaaccagataaaacatgacagcttcgaatttccaaaa
actacagcagaaagtgcaaccatcatagagcagattcgcaagtctgcttgcaggatcact
ccctcattaaatccagctaaaatattcaagttcaatgagaaactggatttggatcagtcc
gtttcaactgaactttttgatggcatgtttttcagtcagaatttggagggtagctctgtc
tttgataacttgggggttaacaatgactatacaggaaatttgtacactagctgtctgccc
ttttctggtgctggctcatctgctgatgctaggaaccttcttacgtctccaaatgggaag
ttgtggtatagaagtttgcaaaagtctgccagttcagagaagcagggcattcagacacca
gacctaccttgcattagcgaagagaatgagaacgtggatgaggagcctgaaaacctatgc
gctaacactccaaagtcgatgaggtcagcgaatcgacgaagttcaattccagaccttcct
tgcatagctgaagagaatgagaaagaagatgagatattagaagctgtcagtcaagtatct
gatggttccaaaagtgggaatgcctctgctgaaaagaagcctcttgctgatgttgatgaa
gaagaccctatgaaatttcttccatctgtttctaacgtcaagatccctgttgatagacag
agcctagattctgtcaatactgcgtttagtttttctgctacgtgcaacaacagtgtcaaa
agtaaaccagaaaggaagatgggtggtagccgaagattcacaggtaaaggtaaagagaat
caaggtggagcaggcgctggaagaaatgttagaccccctagtagcaggttcagtaagact
aagttgtcttgcaactcgagtttgacttctgtagggccgcgattaccagataaagaacct
aggcacaacaacattgtctcaaacatcacttcgttcgttccacttgtgcagcagcaaaaa
gcagctgcagcaatcattacaggcaagagggatgtcaaagtaaaggccctagaagcagct
gaggcctcaaaaaggatggctgaacagaaagaaaatgaacgcaagatgaagaaagaagca
atgaagcttgaacgggcaaggctggaacaagaaaacctgagaaagcaagagattgagagg
aaaaagaaagaagaagagcgaaagaaaaaggaagctgaaattgcatggaagcaggagatg
gaaaagaaaaagaaagaagaagagcggaagagaaaagagtttgaaatggcggataaaaag
aggcagagggaagaagacaagaagttgaaggaagctaaaagacagagagttgcagaaatg
cagagacaacaaaaagaggctgatgagaaattacaagctgaaaaggaactgaaaagaaag
gctatggatgcgaagataaaagcactgaaggaacttaaagaagaacaaggtaatgctagg
atccgtgaagcaagaccaaagagtaattccagcgacgataccaatgcatcaagatcctcg
agagaggatgatctcaaggtgataagcaacatagggaaaatgtctgaagagtcctacgac
atctctccatacaaatgctcagacgacgaagatgaagaggaagacgacgatgacgacatg
tcaaaccacaaattcgttccttcttgggccagcaagagcaatgtacttctcggcgtcatt
tctcaagaaaatcgtgatcccgatgttgctttccctgcaaaacgcttccgcagtataacc
aaagttcttttgccgcgaaagttccgaagccagtag
DBGET
integrated database retrieval system