Brassica rapa (field mustard): 103857645
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Entry
103857645 CDS
T03449
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103857645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brp02000
]
103857645
04147 Exosome [BR:
brp04147
]
103857645
04090 CD molecules [BR:
brp04090
]
103857645
Enzymes [BR:
brp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103857645
Transporters [BR:
brp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103857645
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103857645
CD molecules [BR:
brp04090
]
Proteins
103857645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
Zeta_toxin
AAA_22
RsgA_GTPase
AAA_29
AAA_15
AAA_21
AAA_5
nSTAND1
AAA_30
SbcC_Walker_B
AAA_25
APS_kinase
DUF87
Rad17
PBP_N
ECH_2
Motif
Other DBs
NCBI-GeneID:
103857645
NCBI-ProteinID:
NP_001288986
UniProt:
Q2V606
LinkDB
All DBs
Position
A03:9078949..9084602
Genome browser
AA seq
1300 aa
AA seq
DB search
MQGLELLPEPSSNSNSNSRNPETELQEHPPEMGNGGGTPPPPPPATVEEPKKAEIRGVAF
KELFRFADGLDYVLMTIGSVGAFVHGCSLPLFLRFFADLVNSFGSNANNVDKMMQEVLKY
ALYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQDIQFFDTEVRTSDVVS
AINTDAVMVQDAISEKLGNFIHYMALVTIAVVPLIAVIGGIHTTTLSKLSNKSQESLSQA
GNIVEQTVVQIRVVMAFVGESRASQAYSSALKTAQKLGYKTGFAKGMGLGATYFVVFCCY
ALLLWYGGYLVRHHLTNGGLAIATMFAVMIGGLGLGQSVPSMAAFAKAKVAAAKIFRIID
HKPTIERNSESGVELESVTGLVELKNVDFSYPSRPDVKILNDFTLSVPAGKTIALVGSSG
SGKSTVVSLIERFYDPTSGQVLLDGHDLKTLKLKWLRQQIGLVSQEPALFATSIKENILL
GRPDADQVEVEEAARVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPA
ILLLDEATSALDSESEKLVQEALDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIG
THDELFAKGENGIYSKLIKMQEAAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRS
PYSRRLSDFSTTDFSLSVEASSYPNYRHDKLPFKDQANSFWRLAKMNSPEWKYALVGSVG
SVICGSLSAFFAYVLSAVLSIYYNPDHNYMIKQIDKYCYLLIGLSSAALIFNTLQHSFWD
IVGENLTKRVREKMLTAVLKNEMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQ
NTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKGTQLAG
EAIANVRTVAAFNSEAKIVRLYTANLEPPLKRCFWKGQIAGSGYGVAQFCLYASYALGLW
YASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGQAMRSVFELLDRKTEI
EPDDLDTTPVPDRLRGEVELKHIDFSYPSRPDIQVFRDLSLRARAGKTLALVGPSGCGKS
SVISLIQRFYEPSSGRVLIDGKDIRKYNLKAIRKHIAIVPQEPCLFGTTIYENIAYGHEC
ATEAEIIQAATLASAHKFISALPDGYKTYVGERGVQLSGGQKQRIAIARALVRKAEIMLL
DEATSALDAESERSVQEALDQACSGRTSIVVAHRLSTIRNAHVIAVIDDGKVVEQGSHSH
LLKNYPDGIYARMIQLQRFTHTQVIGMTSGSSSRVKEDDA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggacttgagcttctccctgaaccttcctcaaatagtaacagcaactcaagaaac
ccagaaacagagctccaagaacatccgccggagatgggaaacggcggtggtactcctcct
cctcctcctccggcaacagttgaggagcctaaaaaagcagagattcgtggagttgcgttc
aaagagcttttcagattcgcagatgggttagattatgtactgatgacaattggctctgtt
ggtgctttcgtccacggctgctctttgcctctgttcctcagattcttcgccgatctcgtg
aactccttcggttctaacgctaataacgtcgacaagatgatgcaagaagttctcaagtat
gcgctttactttcttgtcgttggtgctgcaatctgggcttcctcctgggcagagatttcg
tgttggatgtggactggagagagacaaacaacgaagatgaggataaagtacttagaagct
gctttaaaccaagacattcagttcttcgacacagaggttcgaacttcagatgttgtctcc
gccattaacaccgacgctgttatggttcaagacgccatcagcgagaaattgggtaacttc
atccattacatggcgttggtgactatcgcggtggttccgttgatagctgtgatcggagga
atccacaccacaactctctctaagctctctaacaagagtcaggagtctctttcacaagct
ggtaatatcgtcgaacagacagtggtacagatcagggtagtaatggcttttgtcggagag
tcaagagcctctcaagcttactcatcagctttgaagacagctcagaaactcggttacaaa
acaggtttcgctaaaggaatgggacttggcgcgacttacttcgtcgtcttctgttgctac
gctctcttgctctggtacggtggctatctcgtccgccaccatttgaccaacggtggtctc
gctatagccaccatgttcgccgtcatgatcggtggcttggggttgggacaatcagtaccg
agcatggctgcgtttgcgaaagctaaagttgctgctgcaaagatctttagaatcattgat
cacaagccaacgatagagcgtaacagcgagtccggcgtggagctagagtctgtcacgggt
ctcgtcgagcttaaaaacgttgacttttcgtacccgtcaagaccagatgttaagatcctt
aacgacttcacactctctgtacccgccgggaagactatagctttggtcggaagcagtggt
tcgggcaaaagcactgtcgtttcgcttatcgagcggttttacgacccgacctcaggacaa
gttttactagatgggcacgacctgaagacactgaagctcaaatggttaagacaacagatc
ggtcttgtgagccaagaaccagccttgttcgccacttccatcaaagagaatatactctta
ggccgtccagacgcagatcaagtcgaggtagaagaagcagctcgagtcgcaaatgctcat
tccttcatcatcaaactacctgatggcttcgacacacaggttggggagagaggactgcag
ctttcaggtggacagaagcaaagaatagcgatagcaagagccatgttaaagaacccggcg
atacttttactagatgaagccacaagcgctttggattctgaatcagagaagctagtgcaa
gaagctttggaccgtttcatgataggaaggacgactctaatcatcgctcaccgtctctcc
accatccgcaaagctgaccttgtagctgtgcttcagcaaggaagtgtctccgagattggt
actcacgacgagcttttcgccaagggagagaatggtatctactctaagcttattaaaatg
caagaggcagctcatgaaaccgctatgaacaacgcaagaaagagtagtgctagaccgtct
agtgctagaaactcggttagctcaccgataatagctcggaactcttcttatggaaggtca
ccgtactcacggagactctccgacttctcaactactgacttcagcctctccgtcgaagct
tcttcatacccaaactaccgacacgataagctacccttcaaggaccaagccaactccttc
tggcggctagcgaaaatgaactctccggagtggaagtacgctctcgtcggttctgtaggc
tcagtcatctgcggctcactcagcgccttctttgcatacgtcctcagcgcggtcctaagc
atctactacaacccggaccacaattacatgatcaaacagattgataaatactgttacctc
ttgatcggtctctcttctgcggctctcatcttcaacacgctccagcattctttctgggac
attgtgggggagaatctcaccaagagggtccgtgagaagatgcttaccgctgtgctcaag
aacgagatggcttggtttgatcaagaggagaatgagagcgcgagaatctcggcgaggttg
gctcttgatgctaataacgtgagatcagctataggagataggatctcggtcattgtgcag
aacacagcgttgatgcttgttgcttgcactgctgggtttgttctgcaatggagactcgct
ctcgtcttggtcgcagtcttccctgtagttgttgctgcaaccgtcttacagaaaatgttc
atgactggattctctggagaccttgaagcagcgcatgccaagggaacacagctcgctggt
gaagccatagctaatgtcagaacagtcgcagcctttaactcagaagcaaagattgttcgt
ctctacactgcaaacctcgaaccaccgttgaaacgctgcttctggaaaggacagatagct
ggaagtggctacggtgtagctcagttctgtctctacgcatcttacgctctagggctatgg
tacgcgtcgtggcttgtgaaacacggaatctccgacttctccaaaaccataagagtcttc
atggttctgatggtctcagctaatggcgcagcagagacgctcacattagctcctgatttc
atcaaaggtggtcaggcaatgaggtcggttttcgaacttcttgatcgaaaaaccgagatc
gaaccggatgatcttgacaccacgccggttccagaccggttacgcggcgaagtggagctg
aaacacattgatttctcttacccttctagaccagacattcaagttttccgtgaccttagc
cttcgcgctagagctggcaagactttggcccttgtcggtccgagcgggtgcggtaaaagc
tcagtcatctccctgatccagagattctacgaaccgtcctcaggccgagtcttgatagac
ggtaaagacataaggaagtacaatttgaaggccataaggaaacacatagccatagtccct
caagagccttgcttgttcggcacgacaatatacgaaaacatcgcatacggacacgaatgc
gcgacagaagcagagatcatacaagccgcaacgctagccagcgcgcacaagttcatatcc
gcgttgcctgatggctacaagacttatgtcggagagagaggcgttcagctgtcgggagga
cagaaacagaggatagcgatagcacgtgccttggtgaggaaggcagagatcatgctgctc
gatgaggccacaagtgctcttgatgcagagtcagagaggtcggtgcaagaggcgttggac
caggcttgttctggtagaacatctattgtcgtggctcataggttgtctacaatcaggaac
gcacacgtgatcgcggtgattgatgatggtaaagttgtggaacaaggatcgcattcgcat
cttctcaagaactatcccgatggaatctacgcgaggatgatacagttgcagaggtttacg
catactcaggtgattggtatgacgtcagggtcgagttctagggttaaggaagatgatgct
tag
DBGET
integrated database retrieval system