Brassica rapa (field mustard): 103858366
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Entry
103858366 CDS
T03449
Name
(RefSeq) uncharacterized protein LOC103858366 isoform X2
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103858366
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103858366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
Motif
Other DBs
NCBI-GeneID:
103858366
NCBI-ProteinID:
XP_009133960
LinkDB
All DBs
Position
A03:complement(12596100..12612427)
Genome browser
AA seq
2450 aa
AA seq
DB search
MDNETEILSRLAANHLHLAQFEPLKATLLALRVRNPDLAHTILQTIVSTAGRFDNVLWSR
SCSSPSLLAFLSTIELLRFENPASPWGFDSETLGLRADFLLMVQVLIDGDKEGNCVRVLQ
GFLDLGVERLRFDVDASSSGGSSYMIEEEDVVALRNIVLDYSDVFDALCCNVKRQLNGGS
ERCLVEEVEHQVEAMDPREEDSNNVFALILRNVQLAQLDAIRRKLDEGDALGAADRIRYL
HLDYGVGKENYHAVLKALLSRVMEKKDEYGDSWHMVRQNLLFIYKEALSSNCGDLLEMIQ
GIQDDMLLPDSQLHLSLDNDQIPPPLECFRRYLVDSKTERNVEEKNSPLSIAVNSCLRDM
YHYARISGSHVLECVMCAALSYVKKEMLQEANDVLTLFPRLRPLVASMGWDLLPGKTAAR
RKLMRLLWSSNSQAIRLEESTLYGNNTDEKSCVENLCDTLCYRLHLASFAAYISSGKSWT
PKASFLMHGNVSSENNDAEVDPFVENLVLERLSAQSPLRVLFDVVPGVKFKEAISLISMQ
PIASTAEAWKRIQDIELMHMRYALEAIVLALGAMDEVIKDETDVSHHVVFYYLKDLTTHL
EAIKNVPRKIMMVNIVISLLHIDDIRLSSTSSLDLGDLTTEGENEIVISFTRKLLNVLRR
NLPSELIEQECQLDGNYSADGRQALEWRVSMAKHFIEDCEWRLSIMQHLLPLSERQWGLK
EVLSVLRAAPAKLLNLCMQRAKYDIGEQAVHRFALSAEDKATLELAEWVDNAFNRTLVED
VMSRTAEGASAVQDLDFSSLASQLSPLAVILLCIDAAASSAKSTTISKQLLDKSQVMLSE
IYPGGSPKVGFTYWDQVHEVAIISVLRRILKRLQEFLEQDNPQILQASFSGDTIISSATE
SHRQGQKDRALAMLHQMIEDAHKGKRQFLSGKLHNLARAIGDEKPEVDILKGDVRDIPFD
KDGVLGLGLKYKKQSPSGLASRDVDGNHVSHESEEKGKRSFGPFSNKTSTYLSQFILYIA
AIGDIVDGTDTTHDFNFFSLVYEWPKDLLTRLVFDRSSTDAAAKVAEVMSADFVHEVISA
CVPPVYPPRSGHGWACIPVIPTTTYSHSESKVLSPSKEAKPNCYVRSSATPGVPLYPLQL
DVIRHLVKISPVRAVLACVFGGSILYNGSDSVISSSLNDEFTSSPDADRLFYEFSLDQSE
RFPTLNRWIQMQTNLHRVSEFVVTPKQKPDDARIKPDERTAIKRLREHDSDSESDAEEAF
SNNIRPALTHYRARDGGSFETGASRTDPTVFLSFDWENEGPYENAVNRLIDEGKLMDALA
LSDRFLRNGASDWLLELLIKSREETPSTLGRSQGYGSQSIGSNSWQYCLRLKDKQLAATL
ALKYMDTWELDAALNVLTMCSCHLLESDPVSYEVLHRRKALQKYSHILSADDRHNSWQEV
EAECKEDPEGLALRLAGKGAVSAALEVAESAELSIDLRRELQGRQLVKLLTTDPLNGGGP
AEASRFLSSLQDSADALPVVMGAMQLLPDLRSKQLLVHFFLKRRDSNLSDLEVSRLNSWA
LGLKVLAALPLPWQQRCSSLHEHPHLIVEALLMRKQLQYASLILKEFPALRDNNVIMAYA
AKAIAVTVSPPPREPRITVSASRLRQKQRAGPAKPSFTSSLSNFQREARRAFSWGPRNAE
NRTTSKDDRKRKSSGLGAPEKAAWEAMTGIQEDQGSSYSADGQDRLPSVSIAEEWMLTGE
TTKDEAVRASHKYESTPDIVLFKALLSLCSDELVSARTAIDLCIKQMKNVLNSKKLSEAA
SVETIGRAYHATEAFVQGLSYAKSLLRKLLGASEFTNNNGDRSRDLDDMSSDAGSSSVGS
QSTDEPSEVLSLAEIWLGRAELLQSLLGSGISASLDDIADKLSSESLRDRLVSDERYSMA
VYMCKKCKIDVFPVWKAWGLALLRMERYAQARVKFKQAFQLKGEDIPDVIQEIINTIEGG
PPVDVSTVRSMYDHLAKSAPTILDDSLSADSYLNVLHMPSTFPRSERSRRSLESEKNNSV
PGSNFEDGPRSNLDSTRYSECTNYLQEHSRQNLLGFMFRHGHFKDACILFFPPSALPPPL
QSLSLGAVSSSSSPQRTDPLATEYGTIESLCEYCVGYGAISSLEEVITERLESAKHQDQA
INQYIAGALSRICAFLETNRHFNYLYKFLVLKKDYVTSGYCCIQLFMNSTTQEEAVRHLE
HAKAHFEEALTARHRGSDSKKLVTKGVRGKGVNEKLSEEALVTLSSRVKMQIDVVKSFSD
SEGAPWKLSLFGNPNDSETSRRRCEIVETLVEKNFDLAFQVIYEFKLSAVDIYAGVAASL
ADRKKGSQLTELFKNIKGTIQDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLA
CVVCGRLKRAFQIASKSGSVADVQYVAHQASHANSHAVLGLCKQWLSQNM
NT seq
7353 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaaacggagattctctcccgtctcgccgcgaaccaccttcaccttgctcaa
ttcgagcccttaaaggctacgttgctcgctctcagggttcgaaaccccgacctcgcacac
acgattctccagaccatcgtctccaccgccggcagattcgataatgtcctctggtcacgc
tcttgctcttccccgtcgcttctcgccttcctctccaccatcgagcttctcagattcgaa
aaccctgcttccccttggggcttcgattcagagactctaggtttgcgtgcggatttcttg
ttgatggtccaggtcttgatcgatggtgacaaggaaggaaactgcgtacgggttttgcaa
ggttttttggatttgggtgttgagaggttgaggtttgatgttgatgcaagtagcagtgga
ggaagcagctatatgattgaagaagaggatgttgtggctttgaggaatattgtattggat
tactctgatgttttcgatgccttgtgttgtaacgttaagaggcaacttaatggtggttcc
gagaggtgtttggtggaggaagtagaacatcaagtcgaggccatggatcctcgagaagag
gatagcaacaatgtgtttgctttgatactgaggaatgttcagttagcacagttggatgct
ataagaagaaaattggatgaaggagatgcgctcggggcagctgatcgaatacgctatctt
caccttgattatggcgtggggaaagagaattatcatgccgttctaaaggctctcctttca
agagttatggaaaaaaaagatgaatatggtgactcttggcacatggtgcgccagaacttg
ctgtttatctataaggaagctctctcttctaattgcggagaccttcttgagatgattcag
ggtattcaagatgatatgctcctcccagatagccagctacatctatctctcgacaatgac
caaattccaccccctcttgagtgtttccggcgataccttgtagattcgaaaactgagaga
aatgtagaggaaaaaaattccccgctgagcatagcagttaattcttgcctcagagacatg
tatcattatgctcgtatttctggatcacatgtgcttgagtgtgtgatgtgtgctgctttg
tcttacgtgaagaaagaaatgcttcaggaggctaatgatgttctgactttgtttcccaga
cttcgcccattagtagcttccatgggctgggacctgttgcctggaaaaactgcagcccgt
agaaagctgatgcggctactttggtctagtaattcacaagcaattcggttagaagaatct
actctttatggaaacaatacagatgaaaaatcttgtgtggaaaatctctgcgatacatta
tgctatcggctgcaccttgcatctttcgctgcttatatcagttctggtaaatcttggact
ccaaaggcatctttcttgatgcatggtaatgtgtcatctgagaataatgatgcggaggtg
gatccttttgttgaaaatcttgtgttggaaaggctttctgcgcagagtccacttcgggtg
ttgtttgatgttgttccgggcgtaaagttcaaagaagctatatcactgattagtatgcaa
cctattgcttcaactgcagaagcctggaagaggatacaagatattgaattgatgcatatg
cgttatgctttggaggctattgtcttagcattaggtgcaatggacgaggtcattaaagac
gagacagatgttagtcatcatgtggtattttactatttaaaagacctcaccacccatttg
gaggcaattaaaaatgttccacgcaagattatgatggtcaacatagttatttcactctta
catattgatgatattcgtctcagttctacttctagtttggatcttggcgatcttactaca
gaaggggaaaatgaaattgttatatctttcacaagaaagctactcaatgttttacgccgc
aatcttccatcagagctgattgaacaagagtgtcaactggatggtaattacagtgctgat
ggaagacaggctttagaatggagagtatcgatggctaaacatttcattgaagattgtgaa
tggcggttatctattatgcagcatcttttgccactttctgaacgccagtggggtttaaag
gaggttttaagtgttctaagggcggcccctgcaaaacttcttaacctctgcatgcaaaga
gctaagtatgacattggagagcaggcagttcatcggtttgcgttatcagcagaggacaaa
gctactcttgaattagctgaatgggtggataatgccttcaacagaacattggtagaagat
gtgatgtctcgtactgctgaaggagcatctgcggtgcaagatttagattttagttctcta
gcttcacagttgagtccattggctgtgattctactatgcatagatgcggctgcttcttct
gccaaatctacaacaatttccaaacagttattggataagtctcaagttatgttatccgaa
atatatcctggaggatctccaaaggtggggtttacttactgggatcaggtccacgaagtt
gcaataatctctgtattgcgaaggatcttaaagcgtctgcaggaattcctggaacaggat
aaccctcaaattcttcaagccagttttagtggagataccatcatttcatcagccacggaa
tctcatcgacagggtcaaaaagatcgcgctcttgcaatgctacatcaaatgattgaggat
gctcataagggcaagcgacagttcctgagtggaaagcttcacaacctagcgagagcaatc
ggtgatgaaaaaccagaagttgacatactcaaaggggacgtaagagacataccttttgac
aaggatggagttcttggtcttgggctaaaatataagaagcaaagtccttctggtttagca
agtagagatgtggatggaaatcatgtttcacatgaaagcgaagagaagggaaagaggtca
tttggcccatttagcaacaaaacctctacttatctatctcagtttatactctatattgct
gctattggtgacatagtagacggcactgatacaacccatgatttcaactttttctctctt
gtttatgaatggcctaaagacctattgacgcgtctggtgtttgatcgaagtagcacagat
gcggctgcgaaagtcgctgaggtcatgtctgctgattttgttcatgaagtaatatctgcg
tgtgttcccccagtttatcctccacgttctggtcatggatgggcttgtattcccgtcatt
ccaacgactacatattctcactcagagagtaaagtgctgtctccttcaaaagaggctaaa
cccaattgttatgtccgttcctcagcaacacctggtgtccctctgtatcctcttcagttg
gatgtaatcagacatttggtaaaaatatccccagtacgagcagttttagcttgcgtattt
ggtgggagcatattgtacaatggcagtgattcggtcatctcgagctccttgaacgatgag
ttcacaagttctcctgatgcagacagattgttttatgaattttctctcgatcagtctgag
aggtttccaactttaaaccgatggatacaaatgcagaccaaccttcatcgagtttctgaa
tttgttgtgacacctaagcaaaaacctgacgacgcacggattaaacctgatgaaagaact
gcgatcaagagacttcgtgaacatgacagtgactcggaatcggatgcggaagaggctttt
tccaacaatattcgaccagcattgacacactaccgtgctcgtgatggtggatcctttgaa
actggagctagtagaactgatcctacggttttcctttctttcgactgggagaatgaaggg
ccatatgaaaatgctgtaaatagattaattgatgaaggaaaactaatggatgctttagca
ctttcggaccgcttcttgcggaatggggcttccgattggttacttgagctcctaatcaaa
agtagagaagaaactccttcaacattgggacgatctcaaggatatggaagtcagagcatc
gggagcaacagttggcagtattgcctgcggctaaaggataaacagctggcagcgacactg
gctcttaagtatatggatacgtgggagcttgatgcagctttaaatgttcttacaatgtgt
agttgtcatcttttagaaagtgatccagttagctatgaggtgttgcataggagaaaagct
ctgcagaagtacagccacatactttctgcagatgatcgccataatagctggcaagaggta
gaagccgaatgtaaagaagaccctgaaggcttggctttaagattggctgggaaaggagct
gtttccgcagctctggaagtggctgaaagtgcagaattatcaatagatcttagaagagaa
ttacaaggacgacagcttgtaaagcttctaaccactgatccactcaatgggggtggtcct
gcagaagcgtctcgatttctttcttcacttcaagactccgctgatgcactgccagtggtg
atgggtgcaatgcagttattacctgaccttcgttcaaaacagctcctggtccatttcttt
ctgaagcgaagagatagcaatctgtcggatctggaagtgtcccggcttaattcctgggct
ttaggtctgaaagtgttagctgcattgccacttccgtggcaacagagatgctcttcgctt
catgagcatcctcatttaatagttgaagctctgctgatgagaaaacagctacaatatgcc
tcactgatactcaaagagttcccagcattaagagataacaatgttatcatggcctatgcc
gcaaaagctattgctgttacagttagcccaccgcccagagaacctcgaataactgtgtct
gcatcacggttaaggcaaaagcaaagggcagggccagcaaaaccatccttcactagtagt
ttaagcaattttcagagagaggcccgaagagcattttcatggggaccacgtaatgctgaa
aacaggacaacgtcaaaggatgatcgtaaaagaaagagttccgggctgggggcacctgag
aaagctgcttgggaggctatgacaggtattcaagaggaccagggatcatcttattcggca
gatgggcaagatagactaccttctgtttccattgcagaagaatggatgttaactggcgaa
acaaccaaagatgaagctgtacgtgcatctcacaaatatgaaagcacccccgatattgtt
ctcttcaaggctctgctatcactttgttctgatgagctagtatcagcaagaactgcaatt
gacttatgcatcaagcaaatgaagaacgtattgaactccaagaagttatcggaggctgca
tctgttgaaacaattggccgagcatatcatgcaacagaggcatttgtgcagggtttatct
tatgcgaaatcattgctgagaaagcttctaggtgcctctgaatttaccaataacaacggt
gatagaagtagagatcttgatgatatgtcttctgatgctggcagctccagtgttggcagt
caatcaacggatgaaccatccgaagttctctcacttgcagaaatttggctggggcgtgca
gagttgctccaaagtctcctagggtctggaatttctgcttctcttgatgacattgctgat
aaattgtcatccgaatctctacgagacagattagtatctgatgaacggtatagtatggcg
gtttatatgtgcaagaaatgcaagatcgatgtttttcctgtgtggaaagcatggggtctt
gctttgttgcggatggagcgctatgcccaagctcgagtcaaattcaagcaagcctttcaa
ttaaagggagaagacattcctgatgtcattcaggagataataaatacaatagagggagga
ccgcctgtggatgtgtcaactgttcgttccatgtatgaccatttggctaaaagcgcccca
acaattttggacgattcgttatcagcagactcatacctaaatgttctgcatatgccatcg
acattccctcgttcagagagatcaaggagatccctagaatcagaaaagaataattctgta
cccggttcaaactttgaagatgggccccgaagcaacttggatagtactcgctactctgaa
tgtaccaactacttgcaggagcattctcgccaaaaccttcttggttttatgttccggcac
ggtcactttaaagatgcatgcattttattctttccaccaagtgctcttccccctcctttg
caaagtttatctctgggcgcagtcagttcgtcctcttcacctcaacgaacagatccattg
gcaaccgaatatgggaccattgaaagtttgtgtgagtattgtgtcggttatggagctata
tcatccctcgaggaagtaattacagaaagactcgaatccgcaaaacatcaagatcaagcc
ataaaccagtacatagctggagctctttcacgtatatgtgctttcttagagacaaaccgg
catttcaattacctatacaagtttctggtactcaagaaggattatgtcacctctgggtat
tgctgtattcagctttttatgaattctaccactcaagaggaagctgtaaggcatcttgag
catgcaaaggcacactttgaagaagcattgacagcacgtcacagaggttcagactcgaaa
aaacttgttacaaagggggttagaggcaaaggtgtcaatgagaagctgagtgaagaagct
ctggttacgttgtcctctcgggttaaaatgcagattgatgtggtaaagtccttcagtgat
tctgaaggagcaccctggaagctttccttgtttggaaatccaaatgattcagagacatcc
aggagaagatgtgaaatagtggagactcttgttgagaaaaactttgacttggcttttcaa
gttatatatgaatttaagctctcagctgttgatatatatgctggcgttgctgcgtcactc
gccgataggaagaaaggcagtcagttgacagaactattcaaaaacatcaagggaacgatc
caagatgatgactgggatcaggtcctgggtgctgccatcaatgtatatgccaacaagcac
aaagagcgccctgaccgtctcatagacatgttaacaagcagccatcgaaaggtgctggct
tgcgttgtatgtggccgccttaaaagggcgttccagattgcgtccaaaagcggtagcgtg
gctgatgttcaatatgtagctcatcaagcctcacatgccaattcgcacgctgtactcggt
ttgtgcaagcaatggctatcccaaaacatgtaa
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integrated database retrieval system