Brassica rapa (field mustard): 103863175
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Entry
103863175 CDS
T03449
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103863175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brp02000
]
103863175
04147 Exosome [BR:
brp04147
]
103863175
04090 CD molecules [BR:
brp04090
]
103863175
Enzymes [BR:
brp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103863175
Transporters [BR:
brp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103863175
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103863175
CD molecules [BR:
brp04090
]
Proteins
103863175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_21
AAA_15
AAA_16
Glyoxalase_3
Motif
Other DBs
NCBI-GeneID:
103863175
NCBI-ProteinID:
XP_009139181
UniProt:
M4DE37
LinkDB
All DBs
Position
A04:3027842..3034855
Genome browser
AA seq
1400 aa
AA seq
DB search
MMISRGLFGWSPPHMQPLTPVSEVSEPPESPSPYPDPSETGGTATAAQAEDDDEMEEEPD
EAEPPPAAVPFSQLFACADCFDWVLMILGSVAAAAHGSALIVYLHYFAKIVEVLAFSGAR
SEDQYDRLVELSLTIVYIAGGVFVSGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFF
DTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLVIGFVNCWEIALITLATG
PFIVAAGGISNIFLHRLAENIQDAYAEAAGIAEQAISYIRTLYAFTNETLAKHAYATSLQ
ATLRYGILISLVQGLGLGFTYGLAICSCALQLWIGRFFVTSGRANGGEILAALFAVILSG
LGLNQAATNFYSFDQGRIAAYRLFEMISPSSSVANQEGAVLASVQGNIEFRNVYFSYLSR
PEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE
WLRSQIGLVTQEPALLSLSIRENIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVG
RAGLVMTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERIVQEALDLLMLGRSTIII
ARQLSLIKNADYIAVMEEGQLVEMGTHDELINLGGLYAELLKCEEATKLPRRMPVRNYKE
SAVFQIERDSSAGCGVQEPSSPKMIKSPSLQRGNGVFRPQDLCFNTEESPNDHNPAAPEK
LGENGLPLDDADKEPTMKRQDSFEMRLPELPKIDVHGPQHKSNDSDPESPVSPLLTSDPK
NERSHSQTFSRPLSSSDDTKANGKDAQHKESPSFWRLAQLSFPEWLYALLGSVGAAVFGS
FNPLLAYVMALVVTEYYKSKGGHLREQVDKWCLILAAMGIVTVFANFLQHFYFGIMGEKT
TERVRRMMFSAMLRNEVGWFDHEENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVI
VALLIGLLLGWRLALVALATLPILSLSAIAQKLWLSGFSKGIQEMHRKASLVLEDAVRNI
YTVVAFCAGNKVMELYRMQLQRILRQSFLHGMAIGFAFGFSQFLLFACNALLLWCTALSV
KRGYMKLPTAITEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPTIEPDDNS
ALKPPNVYGSIELKNIDFCYPSRPEVLVLSNFSLKVNGGQTLAVVGVSGSGKSTIISLVE
RYYDPVAGQVLLDGRDLKLYNLRWLRSHMGLVQQEPIIFSTTIRDNIIYARHKASEAEMK
EAARIANAHHFISSLPHGYDTHVGMRGVELTPGQKQRIAIARVVLKNAPIILIDEGSSSI
ESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDALAAKNG
LYVRLMLPHFGKGLRQHRLI
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctctcgaggcttattcggatggtctccgcctcatatgcaaccactaacccca
gtctccgaggtctccgagcctcccgagtctccctctccctatcccgacccaagcgagacc
ggcggtacagccaccgcggcgcaggcggaggacgacgacgagatggaggaggagcccgac
gaggccgagccacctcccgctgctgttcctttctctcagctcttcgcttgcgccgattgt
ttcgattgggtgcttatgatcctcggctcggtggctgccgccgcccacggctccgcgctt
atcgtctacttgcactacttcgcgaagatcgttgaggtccttgctttctccggtgcgaga
tccgaggatcagtatgaccgactcgttgagctttctttgactattgtgtacatcgcgggg
ggtgttttcgtttctggttggattgaggtctcgtgctggatactgactggagagaggcag
accgctgtgatcaggtcaaagtatgtccaagtactgttgaatcaggatatgagtttcttt
gatacgtatggtaacaatggggatattgtgagccaagtgctgagcgatgttttgctcatt
cagtcagctttgagcgagaaagtagggaattatattcataacatggctacgtttatcagt
ggacttgttattggatttgtcaactgctgggagattgcgctcattacactagccactggt
cctttcatcgttgctgcaggaggtatatcgaatatatttctccacaggcttgctgagaac
atacaagatgcgtatgctgaagcagccggcattgctgaacaggcgatctcgtacattagg
actttatatgcctttacaaatgaaactcttgccaaacatgcatatgcaacctcccttcaa
gcaacacttagatacggtatattgattagtcttgtgcaaggccttggtcttggattcact
tatgggcttgctatatgctcgtgtgcgctgcaactttggattggacgattctttgttacc
agtggaagagcaaatggtggagaaattttagcagctctttttgctgttattctaagtggc
ctgggtttgaatcaagctgctacaaacttctattcgtttgatcaaggaaggattgctgcg
tatagactgtttgagatgataagtccttcatcctctgtggctaaccaagagggagctgtg
ctggcttctgttcaaggaaatatcgagttccggaatgtgtatttcagctatttgtcacga
cctgagattccaatcttgagtggattttacctaactgttcctgctaaaaaagcagttgca
cttgttggtagaaatggttctggaaaaagcagcattattcctttaatggaacggttttat
gatccgacattaggagaagtacttcttgatggggaaaatattaaaaatctaaaactggag
tggctgagaagccagataggcctggttacacaggagcctgctctgctaagcttgagcata
agagagaatattgcatatggtcgtgatgctactcttgatcagatagaggaggcagctaaa
attgcgcatgcacacacgtttatcagctcgcttgaaaaaggatatgaaactcaggtaggg
agagccggtttagtaatgacagaggagcagaaaataaaactttcaatcgctagagctgtg
cttttaaatcctacaattcttctgcttgatgaagtaactgggggactagatttcgaagct
gaaagaattgttcaggaagctcttgatcttctgatgttggggcgctcaaccataataatt
gcccgacagctaagcttgattaaaaatgctgactatattgccgtgatggaggagggccag
ctagttgaaatgggtacacacgatgaattgataaatcttggtgggctgtatgctgagctt
ctgaagtgtgaagaagcaacaaagcttccgcgaaggatgccagttcggaactacaaggag
tctgcagtatttcagattgagagggactcttcagctggctgtggcgtccaagagccatca
tcacccaaaatgatcaagtctccatctcttcaaagaggtaatggcgtgttccgtccccag
gatctgtgttttaatactgaagaatcacctaatgatcataaccctgctgcacctgagaaa
ttgggggaaaatggcttgcctctggacgatgctgacaaagagccaactatgaaaaggcaa
gatagtttcgagatgaggttaccagagcttcctaaaatcgacgtccacggtccacagcat
aaatcaaacgactcagatccagagtcccctgtttcaccccttttgacttcagatcccaaa
aacgagcgttcccattctcagacgtttagccgtcctcttagttcgtctgatgacactaaa
gcaaatggtaaggatgctcaacacaaggagtcaccttcgttttggaggttggcacagctt
agtttcccagagtggctttatgctctattagggagtgtgggtgctgccgtatttggttcc
ttcaatcctcttctggcttatgtcatggcgttggtagtcacggaatattataagagcaaa
ggaggccacctgcgcgagcaggttgacaaatggtgtttgatccttgccgccatggggata
gtgacagtttttgccaatttcttgcagcatttctactttggtataatgggggagaaaacg
actgagagagttcggaggatgatgttctcagcaatgctgcgtaacgaagttggatggttc
gatcatgaagagaacagtccagatacgttatccatgcgtttagcaaatgatgctactttt
gtccgagctgccttcagcaacaggctttcgatatttattcaagatagttttgctgttatt
gttgctcttcttattgggttgctgcttggttggcgtttggcccttgttgcattagcaact
ctgccaatactctctctttctgccattgctcagaaactgtggctttctggattctcgaaa
ggcatccaggagatgcatagaaaggcatccttagtcctcgaggacgctgttagaaacatc
tacactgttgttgccttctgtgctggtaacaaggtgatggaactctacaggatgcaactc
cagaggatactcagacaaagctttttacacgggatggctatcggttttgcgtttggtttc
tcacagttccttctcttcgcctgcaacgccctcctcctatggtgcactgcgctatctgtt
aaacgcgggtacatgaaattacccacagctataacggaatacatggtcttctctttcgct
acgtttgcccttgtggagccatttggattagcaccttacatcctcaagcgacgcaagtct
ctcatatcagtatttgaaatcatagatcgagtcccaacgattgaaccagatgacaactct
gctctcaagccgcctaatgtctacggaagcattgaactgaaaaacatcgacttctgctac
ccatctcgacccgaagtgttggtgttgagcaacttcagtctcaaagtcaatggggggcaa
actttagctgtggttggcgtctcaggttctggtaaaagcacaataatctcactcgtggag
agatactacgacccagttgctggtcaagtcctactagacgggcgtgacttaaagctatat
aacttgagatggttgagaagtcacatgggtctggtccagcaagagcccataatcttttcc
acaaccatcagagacaatatcatatacgcaaggcataaagcgagcgaagctgagatgaag
gaagcagcgagaatagcaaacgctcatcatttcatcagtagcttacctcacggctacgac
acacatgtggggatgagaggtgtggaacttaccccaggacagaaacagagaatagcgata
gcacgtgtagtgctgaagaacgctcccatcatcttgatagatgaaggaagctcgtctatc
gaatctgaatcaagccgggtcgtgcaggaagctcttgacacgttgataatggggaataaa
acgacaattcttatagcgcatagagctgctatgatgaggcatgttgataacattgtggtt
ctcaatggagggagaatagtggaggaaggtacgcatgatgcgctagcagctaagaatgga
ttgtacgtccgtctaatgctaccacacttcggtaaaggtctacgccaacatcgacttata
tag
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