KEGG   Brassica rapa (field mustard): 103863969
Entry
103863969         CDS       T03449                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X2
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103863969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brp03400]
    103863969
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     103863969
SSDB
Motif
Pfam: HD HD_assoc_2 Rad21_Rec8_N
Other DBs
NCBI-GeneID: 103863969
NCBI-ProteinID: XP_009139985
UniProt: A0A397ZJS8
LinkDB
Position
A04:complement(10011210..10015259)
AA seq 472 aa
MGAYCNDDLNMPVYSAGAPTNELRFSKHVYDNVHGNIYLDPLCLKFIDTEQFQRLRELKQ
LGVTNMVYPGAVHSRFEHSLGVYWLAGETAQKLKNFQGMELDIDKHDLQTVRLAGLLHDI
GHGPFSHMFEREFLPKVMSGCEWSHESMSVKMIDHIVDTHNIDIDAQMLKRVKDMILAST
EFSQLKSNAEKRFLYDIVANGRNGIDVDKFDYLVRDSRACGLGCNFQFQRLTETMRVMDN
EICYRAKEYRNVHKLFATRADLYRTVYTHPKVKAIELMIVDAMVKANDYLGISTNIDDPA
EYWKLDDTILKTIEIAPDQELAEAKDLILRVRRRQLYQFCNEYAVPKEKIEHFKAVTAQD
IVCSQKHTSLTLKEEDIAVTNVKIDLARGRENPLECIKFFKDYESEEKFVIPEERVSHLL
PTTFQDMIVRVYAKKPELVEAVSEAFENFQVRTYGIKAQVHETPEKKKRRVM
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgggagcgtattgcaacgacgacctaaacatgccggtttactccgccggcgctccgacg
aacgagctccgattcagcaagcatgtctacgacaacgttcatggcaacatctacctcgat
cctctttgcttaaaattcattgacacggagcagtttcagaggcttcgtgaactaaagcag
cttggagtgacaaacatggtatatccgggagctgtgcattctaggtttgagcattctcta
ggtgtgtattggcttgcaggcgaaactgcacagaagctaaaaaatttccagggaatggag
ctcgatattgacaaacatgatcttcagactgtgagacttgcgggacttctccatgatatt
ggccatgggcctttcagccatatgtttgagcgtgagttcctgccaaaggtcatgagcggc
tgtgagtggtctcatgagtcaatgtctgtaaagatgattgaccatattgtggacacgcat
aacattgatattgatgctcaaatgttgaaaagagtgaaggatatgatcctagcaagtact
gaattttcacagctgaaaagcaacgcagagaaacgtttcttgtatgacattgttgctaat
ggtcgaaatgggattgatgtggacaagtttgactaccttgtccgtgattctcgagcttgt
ggactgggatgcaactttcagttccaaagactgacagagacgatgagagtcatggacaac
gaaatctgctatcgcgctaaggagtaccgtaatgttcacaagttatttgcaacacgtgct
gatctctatcgaactgtctacacacatccgaaagtaaaggcaatagagcttatgatagta
gatgctatggtcaaagccaacgattacttggggatttctactaacattgacgacccagct
gaatactggaagttggacgatacaatcctgaaaaccattgaaatagctccagatcaagaa
cttgcagaagctaaagacctgatactccgcgttcgcagaaggcagctgtaccaattctgt
aacgagtatgcggttccaaaggaaaaaatcgaacatttcaaagccgttactgctcaagat
atcgtctgttctcagaagcatacaagcttaacactcaaagaggaggatatcgctgttacc
aatgtcaagattgatttagctcgtgggagagaaaaccctcttgaatgcatcaagttcttc
aaggattacgagagtgaagagaagtttgtgatacctgaggaaagagttagtcacttgtta
ccaacaacatttcaagacatgatagtgagagtatatgccaagaaaccagaactggtagaa
gcagtttctgaagcatttgagaacttccaagtgagaacgtatggaatcaaagctcaagtt
cacgaaacacctgagaaaaagaaacgccgtgtcatgtaa

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