Brassica rapa (field mustard): 103871863
Help
Entry
103871863 CDS
T03449
Name
(RefSeq) alpha-amylase 1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00500
Starch and sucrose metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
103871863
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
103871863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
103871863
NCBI-ProteinID:
XP_009148429
LinkDB
All DBs
Position
A01:12212232..12215871
Genome browser
AA seq
435 aa
AA seq
DB search
MKNTDNSQQNNNMACLNAKLLFSFLLVFFPTFTVSTLLFQGFKWESWMKEGGFYNSLHNS
IDDLSNSGITHVWLPPPSQSVSPEGYLPGKLYDLNSSKYGSETELKSLIAALKQKGIKAV
ADIVINHRTAERKDDHCGYCYFEGGTSDDRLDWDPSFICRGDTNYAGTGNPDTGEDYKPA
PDIDHLNPRVQKELSEWMNWLKSEIGFSGWRFDFVRGYAASVTKSYVQNTSPDFAVGEKW
DDMKYGGDGKLEYDQEEHRSGLKHWIEEGGGGVLTAFDFTTKGILQSAVGGELWRLKDSQ
GKPPGLIGIMPGNAVTFVDNHDTIRPNSWAFPSDKVLLGYVYILTHPGTPCIFYSHYIEW
GLKDSISKLVAIRNRNGIGSTSSVMIKAAEAELYLAMIDEKVIMKIGPKLDIGTLVPPNF
VLAYSGLDFAVWEKK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacagacaattcacaacagaacaacaacatggcttgtcttaatgcaaaacta
ctcttctctttcctcctcgtcttcttccccaccttcacggtttccaccttgttgttccag
ggtttcaagtgggaatcatggatgaaagaaggaggattctacaactctcttcacaactcc
atcgacgaccttagcaactctggaatcactcatgtctggcttcctcctccttctcaatcc
gtttctcctgaagggtacttacctggtaagctatacgatctaaacagctccaagtacggt
tcggagacggaactgaagtctctgatcgcagcactgaaacagaaagggatcaaagctgtg
gctgatattgtgatcaaccacagaacggctgagaggaaagacgatcactgtgggtactgt
tatttcgaaggcgggacttccgatgatcgtttagattgggatccttccttcatctgtcgt
ggcgatactaactacgcgggtactggaaaccctgacaccggggaagattataagccggcc
ccggacatcgaccaccttaaccccagggttcagaaagagctgtcggaatggatgaactgg
ctcaagtccgagatcggattcagtggttggagattcgattttgttagaggctatgcagct
tccgtcaccaaatcatacgttcagaatacttcacccgattttgcggttggtgagaaatgg
gacgatatgaagtacggaggagatggtaaactggagtatgatcaggaggagcatcgctcg
ggtcttaaacactggatcgaggaaggtggtggtggtgtactaacagcttttgatttcacg
accaaagggatcttacagtctgcagtaggaggtgagctttggaggctaaaagactctcag
ggaaagccacccggtcttatcggaatcatgcccggaaacgcagtgacgttcgtagataac
cacgacactatcagaccaaactcgtgggcttttccttcagataaagtcttgcttggatac
gtttatattcttactcaccctggcaccccttgcatcttttatagtcattacatcgaatgg
ggtctaaaagatagtatctcgaagttggtggcgatcaggaatagaaatggtattggtagt
acaagctctgttatgatcaaagcggccgaggcggagctctacttggctatgattgatgaa
aaggttatcatgaagattgggccaaaactggatataggaactctcgttcctccaaatttt
gttttagcttattcaggtcttgattttgctgtatgggagaagaagtga
DBGET
integrated database retrieval system
