Bacillus rugosus: M0696_10550
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Entry
M0696_10550 CDS
T08218
Symbol
ldcB
Name
(GenBank) LD-carboxypeptidase LdcB
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
bry
Bacillus rugosus
Pathway
bry00550
Peptidoglycan biosynthesis
bry01100
Metabolic pathways
bry01502
Vancomycin resistance
bry02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M0696_10550 (ldcB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M0696_10550 (ldcB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
M0696_10550 (ldcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bry01002
]
M0696_10550 (ldcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bry01011
]
M0696_10550 (ldcB)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bry01504
]
M0696_10550 (ldcB)
Enzymes [BR:
bry01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
M0696_10550 (ldcB)
Peptidases and inhibitors [BR:
bry01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
M0696_10550 (ldcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
bry01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
M0696_10550 (ldcB)
Antimicrobial resistance genes [BR:
bry01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
M0696_10550 (ldcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
BTRD1
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
UPV77314
LinkDB
All DBs
Position
complement(2149523..2150344)
Genome browser
AA seq
273 aa
AA seq
DB search
MKKSGKWFSLAAALSVTAIVGAGCSMSNGDAQKDTKTTAETKQTEQKTADSKKTNTQDNE
FSLESKYFNNTKKVDGLETIQNPENILALVNKQYALPGNYEPSDLVIPDVEFSFEEKIQK
RYIRKEAADALKTMFDAAKKEGYELAAVSGYRSYDRQKVIFDNEVSLKGEKKAKEAVAYP
GESEHQTGLAMDISSRSNGFELNEAFGSTADGKWVQDNAYKYGFIIRYPKNKEDITKYEY
EPWHLRYVGKKAAKVIQDNDLTLEEYFEKVKKI
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtccggtaaatggttctcactggctgccgctttgagtgtaacggcaatagtc
ggagccggctgcagcatgtcgaatggagatgctcaaaaggatacgaaaaccacagcagaa
acaaagcaaacagaacaaaaaacagctgacagcaaaaaaacaaacactcaagacaatgag
ttttcattggaaagcaaatatttcaataacactaaaaaagtagacggtctggaaaccatt
caaaatccagaaaatatactcgcgcttgtcaataaacaatacgcactgcccggaaactat
gaacctagcgatctagtcatacctgatgtagagttttcttttgaagaaaagattcaaaaa
cgttacatcagaaaagaagcggccgatgcattaaaaacgatgttcgatgctgcgaaaaag
gaaggctatgaactggcagctgtctcgggctatcgttcgtatgacagacagaaagtcatt
tttgacaatgaagtaagcctaaaaggggaaaagaaggcgaaggaagcggtcgcttacccg
ggtgagagcgagcatcaaacaggccttgcgatggacatttcgagccggagcaatggcttt
gagctaaatgaagcgttcggaagcacggcagacggaaaatgggtacaggacaatgcttat
aaatatggctttatcattcgttatccgaaaaataaagaagatatcacgaaatatgaatat
gagccatggcatctgcgttatgtaggcaaaaaggctgcaaaggtcatccaagataatgat
ttaacgctcgaagaatactttgaaaaagtgaagaaaatctaa
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