Bacterioplanes sanyensis: CHH28_18435
Help
Entry
CHH28_18435 CDS
T04982
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsan
Bacterioplanes sanyensis
Pathway
bsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHH28_18435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsan03019
]
CHH28_18435
03009 Ribosome biogenesis [BR:
bsan03009
]
CHH28_18435
Enzymes [BR:
bsan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHH28_18435
Messenger RNA biogenesis [BR:
bsan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CHH28_18435
Ribosome biogenesis [BR:
bsan03009
]
Prokaryotic type
rRNA helicases
CHH28_18435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
CMS1
AAA_22
Sacchrp_dh_NADP
AAA_19
DUF5952
Motif
Other DBs
NCBI-ProteinID:
ASP40523
UniProt:
A0A222FQL5
LinkDB
All DBs
Position
complement(4009947..4011752)
Genome browser
AA seq
601 aa
AA seq
DB search
MTDTTTGFASLGLPFSILRALETLGYEEPSPIQADSIPSLLEGRDVLGMAQTGTGKTAAF
TLPLLARTQTEQPSPQVLVLAPTRELAQQVAQAVKSYSQYMPGVGVSAVYGGADYGSQLR
ELKRGPQWVVGTPGRVMDHLRRGTLNLADIKAVVLDEADEMLRMGFIDDVNWILEHTPRQ
RQVALFSATMPREIQQVAETHLKDPVQVKIKTKTTTNANIRQRYWFVAGAHKNDALLRIC
EVEDFDAMMVFVRTKQATEEVAEYMQAQGFRCAPLNGDIPQQLREKAVDKLKRGQLDIIV
ATDVAARGLDVERISHVINYDIPSDTESYVHRIGRTGRAGRDGEAIAFIRGREKRLLRDI
EKATRQTIAEMPLPTAKDVNDKRRQRFMGRLMDAVKPEQNKLYREMIEELLREHPLDALD
LATAAAALLQGNKPLFLDEKADQRMQERRERPERDRERPERGERGERGRKALPEAQPKPL
KGMKDVDMVRYQVAIGYDDGLRPGNLVGAVANEAELDSKYIGHIEILGQFSVIDLPAGMP
PETLQTLKRARVCGKALGLKAYNPEQVPEGGRPPRRDGNKGPRRGDGQKKFNRNKPRRQA
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacactacgacaggcttcgctagcctgggcttacctttttctattcttcgtgca
ctggaaactttgggctacgaagaaccatcaccgattcaagcagacagtatcccgtctctg
ctggaagggcgtgatgtgctgggtatggcacaaaccggtaccggtaaaaccgctgctttc
accttgccgcttttggcgcgcacgcaaactgaacaaccgtcaccgcaagtgttggtatta
gcacccacgcgtgaattggcgcagcaggtggcgcaggcggttaaaagctacagccaatac
atgccaggtgtgggtgtttctgctgtttacggtggtgccgactatggcagccagctgcgc
gaactgaagcgtggccctcaatgggtggttggtacacccggtcgagtgatggatcacttg
cgccgcggcaccctgaacctggctgatattaaagccgtggtactggacgaagccgatgaa
atgctgcgcatgggctttatcgatgatgtgaactggattctggaacacaccccgcgccag
cgtcaggtggcgttgttctcagccaccatgccgcgtgaaattcagcaggtcgctgaaacg
cacttgaaagatccggtacaggttaaaatcaaaaccaaaaccaccaccaacgccaatatt
cgtcagcgctactggtttgtggccggtgcgcacaaaaacgatgctttgctgcgtatctgt
gaagtcgaagacttcgacgccatgatggtattcgtgcgcactaagcaagctaccgaagag
gtcgctgagtacatgcaggctcaaggctttcgctgtgcgccgttgaacggtgacattccg
cagcaactgcgcgaaaaagccgtcgacaagctcaagcgtggtcagctggatattattgtg
gcgacggacgtagcggcgcgtggtctggacgtcgagcgcatcagtcacgtaattaactac
gacattccatccgatacggagtcgtacgtgcaccgtatcggtcgtactggccgtgcaggt
cgtgatggtgaagccattgccttcattcgcggacgcgaaaagcgtttgctgcgtgacatt
gaaaaagccacccgtcaaaccattgcagaaatgccattgccgacggctaaagacgtcaac
gacaaacgtcgtcagcgctttatgggccgtttgatggatgcggtgaagccagaacaaaac
aagctgtatcgcgaaatgatcgaagagctgctgcgtgagcacccgctcgatgcactggac
ttggccaccgctgccgcggctttgctgcaaggcaataagccactgttcttggacgaaaaa
gccgatcaacgcatgcaagagcgccgcgagcgtccagagcgtgatcgcgagcgtccggaa
cgcggtgagcgcggcgaacgtggtcgtaaagcgttgccagaagcacagcctaagccatta
aaaggcatgaaagacgtcgacatggtgcgctaccaagtcgccatcggttacgacgatggc
ttgcgccctggcaacctagttggtgctgtggctaacgaagccgagctggacagcaaatac
atcggtcatatcgaaatcttgggtcagttctcggtgatcgatctgcccgctggcatgcca
ccggaaaccttgcaaacgctgaagcgtgctcgcgtgtgcggcaaagcactgggcctgaaa
gcctataacccagagcaagtgccggaaggtggtcgtccaccacgtcgtgatggcaataag
ggtccgcgccgcggcgatggccagaagaagtttaaccgcaacaaaccccgtcgtcaggcc
agttaa
DBGET
integrated database retrieval system
