Bipolaris sorokiniana: COCSADRAFT_39674
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Entry
COCSADRAFT_39674 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCSADRAFT_39674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_39674
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
COCSADRAFT_39674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
19139540
NCBI-ProteinID:
XP_007703080
JGI:
Cocsa1_39674
UniProt:
M2SVV8
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MNGAMNRSQPPTAAPVAPVASNGQQPLQQPQPSQQQMPVRRRRPRPQADVLRKPRRPLQN
ITKPMVSLSQMNEARKPPPGPAADGTHSKDALRQEYLDQGATVFPLIVSRKDLKELRHHV
MRLQSKSHVDITDEKQFTPPIKLHRRDPRAPPSGIGSHYEEEDTKEDLEEIKERERIEQQ
KEERRKVREENQAKIAPTGMKKPPAFHKKTEQKYRPDDTPEAKKRQLLRYEETLPWHLED
YENKQTWVGTYESELSETHVMLSATRPGDPNTAIQMAPMERWYRFNVKGKIKPTNDDVDK
ILAKVESGGPRFFAELERRQAQRMKAEDEARMFSGVRTRVGGGADDEGRIKRERFDDDTI
GFVKREADADDIDFNLEEDFADDEEGLNGLFEGEEQDVKEAAEKLKRDQLQAALWDRPDE
QLIAQKEEEERRAAEETRAMEKITRKTLAKREKQYDYLDSDPENPYLTESESDTDSETER
QQAKEEAEKKAAEQNGKAPEAGNVPSGASTKGSNTPSGNHKPGEPKSKKRPGSPNLSEAS
GNESSRKKHKKKHHDKLADGSRKSTLGNLKGAGSGSDSEMTDAGKKRKKEKKEKNRIMLG
GSPAGTPGASRAGSPAANGSRAGSPSAGPSKPSLPSAKEIYESLPPQGMNIQNLILKFKG
RVDKSNTQVFIKLVKAVSRFDKAKSWLTPLEKLPSDEHINAFMSAANAPKPA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgcaatgaatagaagccagccgcctactgcagcgcccgtcgcgcccgtcgcc
tcgaatggccagcagccgctgcagcaaccgcagccatcgcagcagcagatgcctgttcgt
cgccgtcgcccgcgtccccaggctgatgtcctgcgaaaaccccggcgccctttgcagaac
atcaccaaacccatggtgtctttgtcgcagatgaatgaggccaggaagcccccaccaggc
ccggccgctgatggcacgcattccaaagacgcgctgcgacaggagtatctcgatcaaggc
gccaccgtctttccacttatcgtgagccgcaaagatctgaaagagctgcgacaccacgtt
atgcgcctgcagagcaagagccatgttgatattaccgatgagaagcagttcactccgccc
attaagctccaccgtcgagatccccgcgcgcctcctagtggtatcggatcacactacgaa
gaggaggatacaaaggaggatttggaggagataaaggagcgcgagcgcattgaacagcag
aaggaagagcgacgcaaagtacgcgaggagaatcaggccaagatcgcccctaccggcatg
aagaagccccctgctttccacaagaagacggagcagaagtaccgacccgacgacactcca
gaagcaaagaagcggcagctgctacgctacgaagaaacattgccctggcatttggaggac
tacgaaaacaagcagacatgggtaggcacctacgaatcggagctgtcagagacacatgtc
atgctctcagccacacgccctggtgacccaaatacggccatacaaatggcgcctatggag
cgctggtacagattcaatgtcaagggcaagattaagccaactaacgacgacgtggacaaa
atcttggccaaggtcgagagtggtggacccaggttttttgccgagcttgagaggcgtcaa
gcgcagcgtatgaaggctgaagatgaggcgaggatgttcagcggagtgcgcacgcgtgtg
ggtggtggtgctgatgacgagggccggatcaagcgggagcgttttgacgatgatacgatt
ggatttgtcaaacgggaagctgatgccgatgatattgacttcaaccttgaagaagacttc
gcagacgacgaagaaggactcaatggtctctttgagggtgaagagcaagacgtcaaagaa
gcagcagagaagctgaagcgtgatcagctgcaagcagccctttgggatcgtcctgacgag
cagctgatagcacaaaaggaagaagaggagcgcagggctgctgaggagacgagagccatg
gagaagatcacgcgcaagacgctagccaagcgcgagaaacaatatgactatctcgacagc
gaccccgaaaatccatatctcaccgagagcgagtcggacacagactctgagacggagcga
caacaagcaaaggaagaggcagagaagaaagcagctgagcagaacggcaaagccccagaa
gctggcaatgtaccgtctggtgcatccaccaagggctccaacactccctcgggcaaccac
aagcctggggaacctaagagcaaaaagcggcctggttctcccaatctttcggaagctagt
ggcaacgaatcgtcgcgtaagaagcacaagaagaagcaccacgacaagctggctgacgga
tctcggaaatccactcttggcaatctcaagggcgcaggctctggtagtgacagcgagatg
accgacgccggcaagaagcggaagaaggaaaagaaggaaaagaaccgcatcatgctcggt
ggatcacccgccggtactcctggtgctagtcgcgcaggcagccccgccgcaaacggtagc
cgcgcaggtagcccctccgccggcccgtccaaaccctctctgccttccgcaaaggagatt
tatgaatccctcccacctcaaggcatgaacatccagaatctcattctcaagttcaagggt
cgtgtcgacaagagcaacacgcaagttttcatcaagctcgtcaaagcggtttcccgcttc
gacaaggcgaagagctggctcacgcccttagagaagctaccgtccgacgaacacatcaat
gcgtttatgagcgcggcgaatgcaccgaagcccgcatag
DBGET
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