Bipolaris sorokiniana: COCSADRAFT_41319
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Entry
COCSADRAFT_41319 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03022
Basal transcription factors
bsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCSADRAFT_41319
09124 Replication and repair
03420 Nucleotide excision repair
COCSADRAFT_41319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_41319
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_41319
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
COCSADRAFT_41319
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
COCSADRAFT_41319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Tfb4
DUF4769
Motif
Other DBs
NCBI-GeneID:
19139965
NCBI-ProteinID:
XP_007704907
JGI:
Cocsa1_41319
UniProt:
M2QWK4
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MADSDYDFEDEVSDDDYIGNKGSASNTRAQSTAATKRRKVEIPVKEAPQRKAWETEYSRT
VEKTIQPADDGSLGQSVQEREEERKRKRLRKDTKPFQRGIIRHVVLVLDLSEAMLEKDMR
PNRFITMINYTQDYIREFFEQNPISQMSVLGMHDGVCIRVSELSGNPAEHVAAIQGLRSK
DDGKEPKGSPSLQNALELARATLYHTPNHGTREVIVVFGSLLSLDPGDIHQSVKACVRDR
IRVSIIGMGARLKICTEIVKRTNAGDESEYTIATDQEMLRELLQATTTPPVIRQPLLTDK
TAPVTTTQSSESAAALMMMGFPSRVVEDQLTMCACHGNLTMGGYTCSRCSAKVCSLPITC
PSCQLTLLLSTHLARSYHHLFPLRNWATVSWSRAREMGSKQCVGCLAAFSNPPSNAKENG
EAKRDSEAKVAKKDDDDSEEQKASESGRYECRACESHFCIDCDMFAHMVLHNCPGCLGRL
DPNAAATSNGDVEMSG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctgattccgattacgactttgaggacgaggtatctgatgacgattacatcggcaac
aaaggcagcgcctcgaacacacgcgcgcagtccacggcagctaccaagaggcgaaaggta
gagataccggtcaaggaggcacctcaaaggaaggcatgggagacggagtactcgcggacg
gtggagaagacgatacaaccagcagatgatggtagtctggggcaaagtgtacaagagcga
gaagaggagcgcaagcgcaagcggttacgcaaagataccaagccatttcagcgtggcata
ataagacatgtcgtactagtactggatctatcagaggccatgctggaaaaggacatgcgc
cccaaccgtttcatcaccatgatcaactacacgcaagactacattcgcgagttcttcgag
cagaaccctatatcccaaatgagcgttctgggcatgcacgacggcgtctgcatacgcgtc
tcggagctgtccggcaacccggctgagcacgtcgcagcgatacaaggtctgagaagtaag
gatgatggcaaggagcccaaaggctcgcccagtctgcagaatgctctcgagttggcgaga
gcaacactctaccatacgcccaatcatggcacaagagaggttatcgtcgtctttggtagc
ttgttgagtctagaccctggcgatattcaccagtctgtcaaggcgtgtgtgagggaccga
atacgggtcagtatcattggcatgggcgcgcgcctcaaaatatgcaccgagattgtcaag
cgaaccaacgcaggcgacgaatccgaatacacaatcgccacagatcaagagatgctccgg
gaactgctccaagccacaacgacaccacctgtcatccgacagcctctgcttacggacaag
actgcaccagtaacgacaacccaatcttcagaatcagccgctgcgctaatgatgatgggc
ttcccgtcacgggtagtagaagatcagttgaccatgtgtgcatgtcacggaaacttgaca
atgggcggctatacgtgctctcggtgcagcgcaaaagtttgctctctacccatcacttgt
ccctcatgccaactcacgctcctcctctccactcatctggcacgctcgtatcaccatctc
tttcccctccgcaattgggccacagtgtcgtggtcgcgcgcccgggagatgggcagcaaa
cagtgcgtgggctgtttagctgccttcagcaacccgccgagcaatgccaaagagaacggt
gaagccaaacgagactcggaagcaaaagtcgcaaaaaaggacgatgatgacagtgaggag
cagaaagctagtgaaagtggcaggtatgaatgtagggcttgtgaaagccacttttgcatt
gactgtgatatgtttgcgcatatggtactgcataactgcccaggatgtttgggaaggcta
gatcctaacgcggctgctacaagcaatggggatgtggagatgagtggctga
DBGET
integrated database retrieval system
