Bipolaris sorokiniana: COCSADRAFT_79093
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Entry
COCSADRAFT_79093 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
COCSADRAFT_79093
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsc02000
]
COCSADRAFT_79093
04147 Exosome [BR:
bsc04147
]
COCSADRAFT_79093
04090 CD molecules [BR:
bsc04090
]
COCSADRAFT_79093
Enzymes [BR:
bsc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
COCSADRAFT_79093
Transporters [BR:
bsc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
COCSADRAFT_79093
Exosome [BR:
bsc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCSADRAFT_79093
CD molecules [BR:
bsc04090
]
Proteins
COCSADRAFT_79093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
AAA_30
RsgA_GTPase
AAA_21
AAA_25
AAA_18
AAA_15
APS_kinase
AAA_23
Rad17
DNA_pol3_beta
Motif
Other DBs
NCBI-GeneID:
19140708
NCBI-ProteinID:
XP_007695957
JGI:
Cocsa1_79093
UniProt:
M2SMC2
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MPISMPSRASIKPFFGFLHLLFYADPTWLDRVLVLVGSIAAIAAGVPFPLIGIVFGQLVD
EINTITCNNQAGSSTPSKEVNITPKILLLVYIAIASFSCIYIHLVCWNLASQRLAQRVRD
RYLRNLLRQDMTFFDKLQAGEVSSRLNGDIQAIESGTGEKVGVALTCISFCVTAYIVGFI
KNAEIAGMLVSLIPAFLLMAVVGGHFVGKYSIKLGECFGSASAIASEALSHVGLVHALGA
NVRLEEKFKGHLKSARDQGIKKAIAAAVQAGLLYLFAFSASALGYWQGSRRVADSLEGKG
SATIGEIYTVTFILLDGAIVLSQIAPMLPLFGGAIAAFERLRKDIETEPSIDNTSAAAEK
LSNVEGAIEFCNVAFTYPSRPDHPVLNSISLKCEAGQLTAIVGLSGSGKSTIASLISRFY
DPQSGDVLLDGRNIKDINVKNLRGFISLVQQEPSLLDRSILENIALGLVNSPPHAHLEKT
LLSGVLAGVAEDIRKGSQLREAAEKAGKEVVEIVQLVQQAADLADVAIFINRLEFGFGTT
VGSSGNLVSGGQKQRIALARALVRDPKILILDEATAALDSASEQRIQAAIERASAGRTVI
SIAHRLSTIRAASKIIVMKKGDILEQGTHEELLELDGSYADMVRLQTVKAEDGPSSSRAS
LESRDADTLSDEKHTMKAQEADPTTINDLSNPDFAEPLKGAIVAGSIRKTMLPLTRPYTL
LVLLAFFAALIVGGQYCGSGLLFGNVMGLMSPCNDPDYIRSRGELLSGLWFMLACIAFFA
NFTSWAAFGILSERLIYKVRNLSLQTLLHQPLQWHESEARNPSMLLEYITKDGNSLVGFS
GSIVGTLFSVVVNFVAAIVLSHIIAWRIAIVCLVVVPLLLGAGYMQLRAIGRFAVKHAGA
FSSSIGVTIEAVSNIKTVHALSIENEILQTYRRSLKAPRKEMVQQSFKTNVWLAVANSCG
SFIYAFAYWWGSKNIIEGRYTQTQFFVILIAMLVSAQLWGQLFTLAPEIAKAKSAISRIC
GLIELGTDASGIRNGKFTSDSDFHEKGDDVEALAESTSPTSAQGGARVVFQDVGFSYPAR
PGIPVLTSLSLSIQPGQFCALVGPSGAGKSTVLALLERFYLPSTGSIFINGVDISRHHGA
SFRDDIAYVPQENILFQGSIKFNISLGARPGHVPSDEEIHEACKLANIHETIMELPQGYD
TECGSSGNQLSGGQRQRLSIARALVRKPKLLLLDESTSALDAESEKALELGLERAVKGHG
VTVIAIAHRLRTIARADVIFLVEAGKVVDQGRHEELVQRSESYRVNALHQMLG
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcagcatgccctcgcgggcctctattaagcccttcttcggcttcctccatctc
ctcttttacgcggatcccacatggctcgacagggtacttgttctcgttggcagcatagct
gccatcgcagcaggcgtgccattcccactcataggaattgtcttcggccaactcgttgat
gaaatcaacacaataacctgtaacaaccaggctggcagctccacgccatctaaggaagtt
aatatcacgcccaaaattcttctcctggtctatatcgccattgccagtttttcctgcatt
tacatccatctggtatgttggaatctggcttcccagaggttggctcaacgtgttcgggat
cgctacctccgcaatctcctacgacaagatatgacctttttcgataaactccaagccggt
gaagtatcctctcgtctgaatggtgacattcaggcaatcgaaagtggtaccggtgaaaag
gttggcgttgctctgacatgcatatccttctgtgtcaccgcgtacatagtcggctttatc
aagaatgctgagatagcgggcatgcttgtgtctctgattcctgcgttcttgctcatggca
gtagttggtggtcactttgtcggaaagtatagcatcaagttgggggaatgttttggatcc
gccagtgccatcgcttctgaagctctcagtcatgtcggtcttgtccatgctcttggggcc
aatgtcagacttgaagagaagttcaaagggcatttgaaaagtgcacgagaccaaggtatc
aagaaggcaatcgctgctgctgttcaggcggggctactatatctctttgctttctcagct
agtgcacttggttattggcagggtagtcgcagagtcgcagattctcttgagggcaagggt
agtgcgactattggagaaatctatacggtcacattcattctcttagatggtgctattgtt
ctgagtcaaattgcgcccatgctaccactgtttggaggggccatagctgcattcgagcgc
ttgcgaaaagacattgaaaccgaacccagcatcgacaacacctcggccgctgcggagaag
ctttccaacgtggaaggagcgattgaattttgcaatgttgcttttacatacccatcccgg
cctgaccatcccgtgctgaacagcatctcattaaaatgcgaagctggccaattgaccgcc
attgttggactatctggaagcggcaagtcgacaatagcgagcttgattagtagattctac
gatccgcaatcaggagatgtgctccttgatggccgtaatatcaaagatatcaacgtcaaa
aatctccgaggcttcatcagtctagtccaacaagaaccgtcgcttttggatcgctccatt
cttgagaatatcgccctcggcttagtcaactcaccacctcatgctcatttggagaagact
ttgttgagtggagttcttgctggggtcgctgaagatatcaggaaaggaagtcaactcaga
gaagcggccgagaaagctggcaaagaggtagtggaaattgtccaactcgtgcaacaagcc
gccgatcttgcggacgtggcaatattcatcaacaggctagaattcggatttggtaccact
gtcggctcaagcggaaatcttgttagtggcgggcaaaagcaacgaatcgcccttgctcga
gcactcgttcgggaccctaagatcctcattctggacgaggccactgcagctctagattcc
gcaagcgaacagcgcatccaggccgctattgaacgcgcttctgcgggtagaactgtgatt
tcaattgcgcatcgactttcgactatcagagctgcttctaagatcattgtcatgaaaaag
ggcgatattttggagcaaggtacccatgaagaactgttggaattggatgggtcatatgcg
gatatggtccgattacagactgtcaaggcagaagatggcccttccagctccagagccagt
ctagaatcgcgcgatgccgatactctgtcggacgaaaaacatacaatgaaagcgcaagaa
gctgatcctacgaccataaacgacttgagcaacccagactttgccgaaccactaaaaggc
gctattgttgcgggatctatcaggaaaacgatgcttcctttgacccggccatatacgctt
cttgtcctgttagcgttcttcgcagcgttgatagtcggcggccagtattgcggctccggt
cttctcttcggtaacgttatgggtcttatgtcaccctgtaatgacccagactacattcgc
tcccgaggcgaactgctctccgggctttggttcatgttggcctgtatcgctttctttgct
aatttcaccagctgggcagcgtttggcattctctcggaacgactgatctacaaggttcgt
aacctgagtctgcagacactccttcaccaacctctgcaatggcatgagtccgaggcgaga
aatccttcaatgttacttgagtacatcaccaaagatggaaattcactagtaggattcagc
ggttccatcgtcgggactttgttttctgttgttgtcaacttcgtagccgccatcgtcctg
tcacacattatcgcatggcggattgcaatcgtatgcctcgtggtagtgccactgcttctt
ggcgccgggtatatgcagttacgcgcgattggtcgcttcgctgtcaagcacgctggggca
ttttcgtcgtccattggtgttacaattgaagcggtctcgaacatcaaaacagtacatgct
ctttcaatcgagaacgaaatcctacagacgtaccgaagatccctcaaggctcccaggaag
gaaatggtacaacaaagtttcaagacaaatgtctggttagctgtcgccaattcctgtggc
agcttcatctacgcctttgcctattggtggggatcaaagaacattattgaggggagatac
acccagactcagtttttcgtcatccttattgcaatgctcgtttccgcacagctctggggt
cagctatttacactcgccccagaaatcgcaaaggcaaagagcgccatctcacgcatatgc
gggctcatcgaactaggaacagacgcatccggcataagaaatgggaaatttacatctgat
agcgacttccatgagaaaggagatgatgtcgaggcgctggctgaatcaacgtcgccaaca
tcagcacaaggcggcgctagggttgtattccaagatgttggtttttcctacccggctcgt
cctggcattccagttctcacatcactgtctctctcaatacaaccaggccagttttgcgct
ctggttgggccttctggtgcaggaaaaagcactgtactagcactcttggaacgattctat
ctgccatcaacgggcagcatcttcatcaatggtgttgacatatcgcgtcatcatggggcc
tcattccgggacgacattgcctacgtgccacaagagaatatacttttccaagggagcatc
aagttcaatatctcattgggagcgagacctggtcatgtgccgtcagatgaagaaatacat
gaagcctgcaagttggcaaacatacatgaaaccatcatggagctcccacagggatacgac
accgagtgcggatctagtggcaaccaactctctggtgggcagcgtcagcgcctttccatt
gcgcgagctctagtacggaagcctaaactacttctcctagatgagagtacaagtgcgctg
gatgcggaaagtgaaaaggcccttgagcttggtcttgagcgcgccgtgaagggtcacgga
gtcacggtgattgcaatcgcacaccgattgcggacgattgcaagggctgatgttatattc
ttggttgaagctgggaaggtggtagaccaaggacggcacgaggagcttgtacagcggagc
gaaagctaccgtgtcaatgcccttcaccaaatgttgggataa
DBGET
integrated database retrieval system
