Bifidobacterium scardovii: BBSC_0817
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Entry
BBSC_0817 CDS
T03975
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca00240
Pyrimidine metabolism
bsca00250
Alanine, aspartate and glutamate metabolism
bsca01100
Metabolic pathways
bsca01240
Biosynthesis of cofactors
Module
bsca_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BBSC_0817
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BBSC_0817
Enzymes [BR:
bsca01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
BBSC_0817
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
BAQ30897
LinkDB
All DBs
Position
974318..977704
Genome browser
AA seq
1128 aa
AA seq
DB search
MPKRTDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM
ADATYIEPIATPILEQIIAKERPDALLPTLGGQTALNAAMALGEAGVLKKYNVELIGASL
EAIDRGEDRELFKKVVDEAGAESARSFIAHTLAECDRIADQLGYPLVVRPSFTMGGLGSG
IAHNEEELHRIAGAGIHYSPTDEVLIEEGIEGWKEFELELMRDRNDNVVVVCPIENVDPV
GVHTGDSITVAPCFTLTDREYQKLRDIGIAIIRGVGVDTGGCNIQFAVHPDTGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIRNDITQSTPASFEPTIDYVVTKVPR
FAFEKFPGADPRLTTSMKSVGEAMALGGNFQESLGKAMRSIDKRHMGFNWDGDKPGEAEV
AELLEAIKVPTEHRYLQIQRALWGGATERQIFDSTKIDPWFVRQLAMINDTALEVRDAET
LTKKLLKKAKLAGLSDLQIAHLRKLGDEGENTVRELRWTYGLKPVYKTVDTCAAEFDAVT
PYYYSCYADESELRPREREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN
PETVSTDYDMSDRLYFEPLTFEDVLEIYEAEKKMGPVKGVIVQLGGQTPLSLAARLKAAG
VPILGTTPESIDLAENRELFGEVLKKAHMNAPRYGTALSLEEAREAAHNIGYPVLVRPSY
VLGGRGMEIVYDDDQLVKYVNRALDEAKADTVVSGRLPSPLLIDKFLQDAIEIDVDALFD
GEELYIGGIMEHVEEAGVHSGDAACTLPPSTLSDDQIRRLREGTYAIAKGCGVQGLINVQ
YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMAGETIADQRANGLLLPVGDG
GTIHRGQQVAVKESVLPFKRFRTPVGKTVDVLLGPEMRSTGEVMGFDRDFPHAFAKSQLA
AYEGGLPTGGNVFISVNDTDKRQLPMVAVRLVELGFTIWATEGTASVLRRYGIDSKIVDK
ISTRIDTDPDAPVEVTHAEGSIGKNVVELIEDGSIDMILNTPNSRGSRSDGYSIRAAAIA
ADVPQFTTMTEFSAVLMAIEAVKKNDYQIMSIQEHSQQLFALEKQDLS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgcaccgatatcaagtccgtgatggtgatcggctccggtccgatcgtgatc
ggccaggccgccgagttcgactactcgggcacccaggcctgccgcgtgctgcgcgaagag
ggcatccgagtgatcctggtcaactccaacccggccaccatcatgaccgacccggagatg
gccgacgccacctacatcgagccgatcgcgacgccgatcctcgagcagatcatcgccaag
gaacgccccgacgcgctgctgccgaccctcggcggccagaccgcgctcaacgccgccatg
gcgctcggcgaggccggcgtgctcaagaagtacaacgtcgagctgatcggtgcctcccta
gaggccatcgaccgtggcgaggaccgcgagctgttcaagaaggtcgtggacgaggccggc
gccgaatccgcgcgttcgttcatcgcccacacgctcgccgaatgcgaccgcatcgcggac
cagctcggctatccgctcgtcgtgcgcccgagcttcaccatgggcggcctcggctccggc
atcgcccacaacgaggaggagctgcaccgcatcgccggcgccggcatccactactcgccg
accgacgaggtgctcatcgaagagggcatcgagggctggaaggaattcgagctcgagctc
atgcgcgaccgcaacgacaacgtcgtggtcgtctgcccgatcgaaaacgtcgacccggtc
ggcgtgcacaccggcgactcgatcaccgtggcgccgtgcttcaccctgaccgaccgcgag
taccagaagctgcgcgacatcggcatcgccatcatccgcggcgttggcgtcgacaccggc
ggctgcaacatccagttcgccgtgcacccggacaccggccgcatcatcgtcatcgagatg
aacccgcgcgtctcgcgctcgtccgcgctggcgtcgaaggccaccggcttcccgatcgcc
aagatcgccaccaagctggccctcggctacacgctcgacgagatccgcaacgacatcacc
cagtcgaccccggcctccttcgagccgaccatcgactacgtggtcaccaaggtgcctcgc
ttcgcgttcgagaagttcccgggcgccgatccgcgcctgaccacgtcgatgaagtccgtc
ggcgaggcgatggccctgggcggcaacttccaggagtcgctcggcaaggcgatgcgctcg
atcgacaagcgccacatgggcttcaactgggacggcgacaagccgggcgaggccgaggtc
gccgaactgctcgaggcgatcaaggtgccgaccgagcaccgctacctgcagatccagcgc
gccctgtggggcggtgccaccgagcggcagatcttcgattcgaccaagatcgacccgtgg
ttcgtgcgccagctggcgatgatcaacgacaccgcgctcgaggtgcgcgacgccgagacg
ctcacgaagaagctgctcaagaaggcgaagctggccggcctgtccgacctgcagatcgcc
catctgcgcaagctgggcgacgagggcgagaacacggtgcgcgagctgcgctggacctat
ggcctcaagccggtctacaagaccgtcgacacctgcgccgccgaattcgacgcggtcacg
ccgtactactacagctgctacgccgacgagtccgagctgcgtccgcgcgagcgcgaggcc
gtcatcatcctcggctccggcccgaaccgcatcggccagggcatcgagttcgactacacc
tgcgtgcacgcggtgcaggagctcggcaaggactacgacacgatcatggtcaactgcaac
ccggagaccgtgtccaccgactacgacatgtccgatcgcctgtacttcgagccgctcacc
ttcgaggacgtgctcgagatctacgaggccgagaagaagatgggcccggtcaagggcgtg
atcgtgcagctcggcggccagacgccgctctcgctcgccgcccgcctcaaggccgccggt
gtgccgatcctcggcaccaccccggagtcgatcgatctggccgagaaccgcgagctgttc
ggcgaggtgctcaagaaggcgcacatgaacgcgcctcgctacggtaccgcgctcagcctc
gaggaggcccgcgaggccgcgcacaacatcggctatccggtgctcgtgcgcccgagctac
gtgctcggcggccgtggcatggagatcgtctacgacgacgaccagctggtcaagtacgtc
aaccgcgcgctcgacgaggcgaaggccgacaccgtcgtgtccggccgtctgccctccccg
ctgctcatcgacaagttcctgcaggacgccatcgagatcgacgtcgacgcgctgttcgac
ggcgaggagctgtacatcggcggcatcatggagcacgtcgaggaggccggcgtccactcc
ggcgacgcggcctgcaccctgccgccctccacgctgtccgacgaccagatccgccgcctg
cgcgagggcacctacgccatcgccaagggctgcggcgtgcagggcctgatcaacgtgcag
tacgccttcatggcgaacacgctgtacgtgatcgaagccaacccgcgcgcctcgcgcacc
gtgccgttcgcgtccaaggccaccggcgtggctctggcgaaggccgccgcccgcatcatg
gcgggggagaccatcgccgatcagcgcgccaacgggctgctgttgccggtcggcgacggc
gggaccatccaccgcggccagcaggtcgccgtcaaggagtccgtgctgccgttcaagcgc
ttccgcacgcccgtcggcaagaccgtcgacgtgctgctcgggcccgagatgcgttccacc
ggcgaggtcatgggattcgaccgcgacttcccgcacgccttcgccaagagccagctcgcc
gcctacgagggcggcctgccgaccggcggcaacgtgttcatctccgtgaacgacaccgac
aagcgccagctgccgatggtcgcggtgcgcctggtggagctcggcttcacgatctgggcc
accgagggcaccgcctccgtgctgcgccgctacggcatcgactcgaagatcgtcgacaag
atcagcacgcgcatcgacaccgatccggacgcgccggtcgaggtcacccatgcggagggc
agcatcggcaagaacgtggtggagctcatcgaggacggcagcatcgacatgatcctcaac
acgccgaattcgcgtggctcccggtccgacggatactcgatccgtgccgcggccatcgcc
gccgacgtgccccagttcacgacgatgaccgagttctccgcggtgctgatggccatcgaa
gccgtcaagaagaacgactaccagatcatgagcatccaggagcattcacagcaattgttc
gcattggagaagcaggacctatcatga
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