Bifidobacterium scardovii: BBSC_2057
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Entry
BBSC_2057 CDS
T03975
Name
(GenBank) conserved hypothetical protein
Organism
bsca
Bifidobacterium scardovii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
fn3
Cadherin_4
HYR
Pur_ac_phosph_N
Bact_surface_Ig-like
Motif
Other DBs
NCBI-ProteinID:
BAQ32137
LinkDB
All DBs
Position
2467402..2473467
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AA seq
2021 aa
AA seq
DB search
MADKAPHHDRRWMAPLAALMALAVIAIGAVWADSVTRQQVSLDDGTVWVTSSEHRKAARF
NVALGEADAAVSASATRFDVAQHGNDMILDEGSSVSSVAASTLGTGPKAATDGSTAAMIG
GATTALCSRATGKVWIGQADTLDAMTPSSDPKMTLGSGGMIAVDDHGTVYGYRPRDGMIL
VAEGPASSKARRYGSLSDGRRLDVDDFTVIAGIPVVVARGTIRWNTGSASTGAKGRLRLQ
APPYDGEQRQWVAAAGQGALYLADLVDGVQRTRTLPSGGTGNAAKPVSVGGCVYAAWSQR
ARNHARVCTPNGSGNGSGNSLETDDDPAVFDTLEEIGETSDLVFRTNHRLVLLNDAVTGD
IWNPDESTGLIRIQWNTVRVDQPIGQPQDGGMTGDRHEFSASCSAESGEIRAEDDAFGAR
AGSMRILDVLRNDEQTDCSVLRIIGTGAPVGADISVSPVYGGRYLQLDATRAAVGEASVS
YDIGDGRGQTSTATVTITLVGPSSNAEPAQTDLPTEYEVEQGSVHTSNALGGFADPDGDP
LTLVAARATNSDQVAVSTRADGQLTFDAAAATSGRISVEVTVSDGQATGTGMVYFSIRPA
NTLAAYVDAVVGQTSPGTRTTVDLKPYVHGTSAQSVRLSAVDAPDGAHVTAHASDLSFSF
LSTEPGTYYVPFTVMQGSVPAHGLARIEVQPVTGESARPVAANDIAMLGPDRTAIVEPLT
NDVDPMGGVLSVTAVSSDHEQGIVGGLVSNKRVYLVARRIPIRTVSITYTVANAAGASQG
TIVLHPPAPMADETAPRAPDIDMRVRTGGIVSVDALDHVSFTGRSAVSLSPDLQYDRDAF
KGLVFVSGSLIRYQASSDPGEYRVTYTVTDSSGNASSGTLAITVHERDAGRKAAPTPLPV
EAQVAAGRRVRIPIELSGIDVDGDDVILLGLGNRAPAMGRITEVGSDSMLYEAYADSSGT
DTFTYAVEDWTGQRAQGDIRVGIFRDAQAAGVVARDDEVTLRPGVEAVVPVTRNDIAADG
EPLTVSGIDAPGLDQARAVGDAVSFVTPDREGLFYVTYTASDAAGLSDAATLAVSVDPLA
AIEPPVAHDYRVPAVATIDRKSVDVDIAQWIANPSGTVDELEIGVDPSAFEHARVRPGAR
STTISVDLTDEPQSIAYTVTNTTHGITSAAFVQVPAYGVFPPMLRPKAPPLEVRAGGTLI
IAVADHVRVGVGKTAYVADESSASATKAANGSPYVDDHTLRFVAPKDYAGPASVTFTAAD
GKPGDGGRTIISTAVLTLPITVIGDMAPPPVFSPIMVDVAAGEPAMTIDLTKLTLASPES
CGPDRPCTYALDAAPDAIAADISPSGLLTVSAPKEATPGTIVGIPFTIGHRNGSVRTGVT
ARIIASNRPLARIGAPTIRIAAGSSAQVDLLSDAYNPFPDVPLSMIGCVGAAPPVVIEGC
EGTGPLTIRVDDHAEALSTAVTVTVRDGTLLRDRQVSAQVTVSVVGRPGTPLLSPVTGQP
ENGSVALSWTPGAANGSPVTDYQVLWSGGSKSCGAVTACNITGLVNGTEYVFTVRARNEA
GWSDPSAPVAGMPDIVPTPPTGVTVAGGYHTLTVRWEEPRYAGTPPDGYTVAISGSAGGA
SLTRFVNGTAAVFTIPDEMIADGATFGATVTGRNRAGDGQPGMSDGVAAPWGNPDGIGLS
LTQAGDGIIAEITIGDLRNAGCSGIVLSGDAERIVDCSAPRARIGIPRDKYHAVMTVTAT
LATRLAVPAARSDTARITPLPDVPDITDIDVTLHEGSTATGEGGSCTVSWQPSGGLYDRF
AVRNASGETVSATGSTARIGLVPWRPCGPVTIFSVLNGTESPGVTGGESRVWKVPAVIGA
GTAIWSPTDHAVVEFPDLHINAWDQRHRVDIIIRSDGRERVYPLRTGNHIVVDDFLDDAA
PPWYWTVRVSGDDPALNAVSATAEIQGWRIPVSPSSGRLWSRPGMSPLHGLSVGFTEQPI
VKHPVKHNGAKAPRSRPYPARSAAAAGYALDQPHRRIRRNR
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaggcacctcatcatgatcgccggtggatggcgcccctggccgcattgatg
gcgctggcggtcatcgccatcggcgcggtctgggccgattcggtgacccgccagcaagtg
agcctcgacgacggcacggtgtgggtcacgtcgtcggagcatcgcaaggccgcacgattc
aacgtcgcgctgggagaagcggatgcggccgtctccgcatcggcgaccagattcgacgtc
gcgcagcacggcaacgacatgatactcgacgagggctcgagcgtgagcagcgtcgcggcg
tccacgctcggcacgggtccgaaggccgccacggacggcagcacggcggcgatgatcggc
ggcgccacgacggccctgtgcagcagggccaccggcaaagtgtggatcggccaagccgat
acgctcgacgcgatgacgccgtcctccgaccccaagatgactcttggttcgggaggcatg
atcgcggtcgatgatcacggaacggtctacgggtacaggccgcgtgacggcatgatactg
gtggcggagggcccggcttcgtcgaaggcacgccgatatggctcgctcagcgacggccgg
aggctcgacgtcgatgatttcacggtgatcgcaggcattcccgtcgtggtcgcgcggggc
acgatccgttggaacaccggcagcgcaagcaccggcgcgaagggccgcctgcggctgcag
gcgccgccctacgatggcgagcaacggcaatgggtggcggcggcaggccaaggcgccctt
tacctggcggatctggtcgatggcgtgcagcggacgaggacgctgcccagcggaggcacc
gggaacgcagccaaacccgtatccgtcggcggatgcgtatatgcggcgtggagccagcgg
gcgcgcaaccacgcgcgcgtctgcacgccgaatggctcggggaacggctcagggaatagt
ttggagacggatgacgatccggccgtattcgacacgctggaggagatcggcgagacctcc
gatctggtgttccgcaccaatcaccggctggtgctgctcaacgacgcggtgaccggcgac
atatggaatcccgacgaaagcaccggtctgatccgcatccagtggaacacggtccgcgtc
gatcagcccatcggtcagccccaggatggcgggatgaccggcgatcgccatgagttttca
gcttcctgctccgccgaatcgggtgaaatccgcgccgaggacgacgctttcggcgcgcgg
gccgggagcatgcgcatcctcgacgtgctgcgcaacgacgagcagaccgactgctcggtg
ctgcggatcatcggcacgggggcaccggtcggagcggacatctccgtatcgcccgtttac
ggcggccgctacctgcagttggacgccacgcgtgccgccgtgggcgaggcgtcggtgtca
tacgacatcggcgacggacgcgggcagacctcgaccgccaccgtcacgatcacgctggtg
ggcccctcatccaacgccgaaccggcgcagaccgatctgcccacggaatacgaagtcgag
cagggatcggtccatacgtcgaatgcgctcggcggtttcgccgatccggacggggacccg
cttaccctggtagcggcacgggcgaccaacagcgatcaggtggccgtttcgacgcgcgcc
gacgggcagcttaccttcgatgcggccgccgcgacctccggccgcatcagcgtggaggtc
accgtatccgacggacaggccacgggcaccggcatggtgtatttctccattcgcccggcg
aacacgcttgccgcctatgtcgacgcggtcgtcgggcagacctcgccgggcacgcgtacc
accgtcgatctgaagccctatgtgcacggcacgtccgcccaatcggtacgcctgtccgcc
gtggacgcgccggatggcgcgcatgtcacggcgcatgcctcggatctgtcgttctccttc
ctgtccaccgagccgggcacctattatgtgccgttcacggtcatgcagggatcggtgccc
gcgcacggcctggcccgtatcgaagtgcagccggtaaccggcgaaagcgcccgcccggtc
gccgccaacgacatcgcgatgcttggccccgatcgcacggccatcgtcgaaccgctgacc
aatgacgtggatcccatgggcggggtgctgtcggtcaccgcggtgtcgtccgaccacgag
cagggcatcgtcggcggtctggtcagcaacaaacgcgtatatctggtcgcgcgccgcatc
ccgatccggacggtgtcgatcacctatacggtggcgaatgcggccggcgcgtctcagggc
accatcgtgctgcatccgccggcgccgatggccgacgagaccgcaccgcgcgcccccgac
atcgacatgcgggtgcgcacaggcggcatcgtctcggtggatgcgctcgaccacgtctcc
ttcaccggtcgctcggcggtatcgctgtcccccgacctgcaatatgaccgggatgcgttt
aaggggctcgttttcgtctcgggcagcctgatccgctaccaggcgtcatccgatcccggc
gaataccgggtgacgtacacggttacggatagctcgggcaacgcctcgtcaggcacgctt
gccatcaccgtgcacgagcgggacgccggccgcaaggcggcgccgacgccgctccccgtc
gaagcgcaggtggccgccgggcgacgggtgcgcatccccatcgagttgtccggcatcgac
gtggacggtgatgacgtcatattgcttggattgggcaaccgcgcgcccgcgatggggcgc
atcaccgaagtcggctcggattccatgctgtacgaggcgtatgcggactcgtctggcacc
gacacgttcacctatgccgtggaggattggaccggccagcgagcgcagggggacatccgc
gtcggcatcttccgcgatgcgcaggccgccggggtcgtggcgcgggatgatgaggtcacg
ttgcgcccgggggtcgaggccgtcgtaccggtgacccgcaacgacatcgccgccgacggc
gaaccgctgaccgtcagcggcatcgatgcgcccggactcgaccaggcgcgggcggtcggc
gacgccgtgtcgttcgtcacgcccgatcgggagggactgttctacgtgacgtatacggcc
agcgacgccgccggactgtccgatgcggccacgcttgccgtatcggtcgatcccctcgcc
gcgatcgagccgccggtggcgcacgactatcgggtgcccgccgtggcgacgatcgaccga
aaatccgtggacgtggacatcgcgcagtggatagccaacccttccggcaccgtcgatgag
ctggagatcggggtggatccgtccgccttcgagcatgcacgggtccggcccggcgcccga
tccacgacgatcagcgtggatctgaccgatgagccgcagtccattgcctatacggtgacg
aacacgacgcacggcatcacgtccgccgcattcgttcaggtgccggcctacggcgtgttc
cctccgatgcttcgccccaaggcgccgccgttggaggtccgagccggcggcacgctcatc
atcgccgtagccgaccatgtgcgcgtcggcgtaggcaaaaccgcgtatgtggcggacgag
agttcggcgagcgccaccaaagcggccaatggcagcccgtatgtcgacgaccatacgctg
cgtttcgtggcgcccaaggactacgccggcccggcctcggtcaccttcaccgccgccgac
ggcaagccgggcgacggaggaagaacgatcatcagcacggcggtgctgaccctgccgatc
acggtgatcggcgatatggcgccgccgcccgtgttctcgccgatcatggtcgacgtggcg
gccggagagcccgccatgaccatcgatctgaccaagctgacgctcgcctcgccggaatcc
tgcgggccggatcggccctgcacctatgcgctcgatgcggcgccggacgcgatcgccgcc
gacatcagcccaagcggcctgctgacggtcagcgcgccgaaggaggcgacaccgggcacg
atcgtcggcatcccgttcacgatcgggcatcgcaacggatcggtccgcacgggagtgacg
gcgcgcataatcgcgtcgaaccgtcctctggcccgcatcggcgcgccgaccatacgcatc
gccgccggttcctcggcgcaggtggatctgctgtccgacgcatacaacccattcccggat
gtcccgctgtccatgatcggatgcgtgggcgccgcgccgccggtcgtcatcgagggatgc
gaaggaaccggcccattgacgatccgcgtggacgaccatgccgaggccctgtcgaccgcg
gtgacggtcaccgtcagggacggcacgctgctccgggaccgtcaggtgagcgcgcaggtc
accgtatccgtggtcgggcgcccaggcaccccgctgctgtcgccggtgaccggccagccg
gaaaacggctccgtggcgttgtcgtggacccccggcgccgccaacggcagcccggtcacc
gactatcaggtgctctggagcggcggctcgaagtcctgcggtgccgtgaccgcctgcaat
atcaccgggcttgtcaacggcaccgagtacgtcttcacggtcagggcccgcaatgaagcc
ggatggtccgatccttcggcgccggtcgccggcatgcccgatatcgtgccgaccccgcca
accggcgtcacggtggccggcggctaccatacgctgaccgtgcgctgggaggagcctcgg
tatgccggcactcccccggacggatacacggtggcgatatccggatcagccggaggggcg
tccctgacgcgattcgtcaacggcacggccgccgtattcacgattcccgacgagatgata
gccgacggagccacgttcggagcgacggtcaccggccgcaaccgggccggcgacggccag
cccggcatgtcggacggcgtcgccgcgccgtgggggaatccggacggcatagggctctcc
ctcacgcaggccggagacggcatcatcgcggaaatcacgatcggcgatctgcgcaacgcc
ggatgctccggcatcgtgctctccggcgatgccgagagaattgtggactgctcggcccca
cgcgcgcgcatcggcattcctcgggacaagtaccatgccgtcatgaccgtcaccgccacg
ctggccacgcgcttggccgtgcccgcagcgcgctcggatacggcgcggatcacgccgctt
cccgacgttcccgatatcaccgatatcgacgtcacgctgcatgagggatccaccgcgacg
ggcgaaggcggatcctgcacggtctcgtggcagccctcgggcgggctgtatgaccgtttc
gccgtgcgcaacgcctccggggagacggtatccgccaccggttcaacggcgcggatcggc
cttgttccatggcggccatgcggtccggtgaccatattctcggtgctgaacggcacggaa
agccccggcgtcaccggcggcgagtcccgggtctggaaggttccggccgtgatcggcgcg
gggaccgccatctggtcgcccaccgatcacgcggtcgtcgaattccccgatttgcacatc
aacgcatgggaccaacgccatcgcgtcgatatcatcatccggtccgatggccgtgaacgc
gtctatccgttgcgaaccggcaaccatatcgtggtggacgacttcctagacgacgccgcg
ccgccgtggtactggaccgtgcgcgtatccggcgacgatccggcgctgaacgcggtatcc
gcaacggccgagatacaagggtggaggatacccgtgtccccgtcatcgggccggctttgg
tcgaggcccggcatgagtcccctccatggactctccgtcgggttcacggagcaacccatc
gtgaaacatcccgtgaaacataatggtgccaaggcgccgcgatcgcgtccgtatccggct
cgttcggcggcggccgcgggctacgcgttggatcagccgcatcgccgcataaggaggaac
cgatga
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