Blastococcus saxobsidens: BLASA_0902
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Entry
BLASA_0902 CDS
T01752
Symbol
trwC7
Name
(GenBank) Conjugative relaxase TrwC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BLASA_0902 (trwC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_0902 (trwC7)
Enzymes [BR:
bsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BLASA_0902 (trwC7)
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BLASA_0902 (trwC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
AAA_22
Helicase_RecD
AAA_11
PhoH
AAA_16
T2SSE
Hera_DD
Thymidylate_kin
ResIII
UvrD-helicase
SRP54
ATG14
Motif
Other DBs
NCBI-ProteinID:
CCG01853
UniProt:
H6RTJ5
LinkDB
All DBs
Position
869397..873062
Genome browser
AA seq
1221 aa
AA seq
DB search
MKIYAGAPAAARHYVEVDRSRADDYYLAEGTGVARRFTAGDGRVTELAPLTGQAYETWVA
GRDPATNDARGQLRHDEHAVRFVEVIVNGPKTWSIASALHPDIARAYEAAQDRAAGQIIA
WLSEHATTRVGPRGGQVPMPVEVLEAATVRHFTSRAGDPHWHLHLQFLSRVFAAGKWRGM
FTVDVRDSLAAINGIGHAAMDTDPELNATFAAHGYAKDATGEIRELSDYVGPFSARHAQI
ARNADRYEREWTTAHPGEHPGPALRRSWDTRAWAEGRPDKVTPQSGVNVTERWRTELHRL
GFRPPSRPVPLVPAPVGALNRDELVGRALTRLAAGRSAWNAADVRGEVERLIAAEGIVTG
PAVRIELAEDLTARALGRCVPLLDRDGIPEHIRAWTSRPVLAVETDLTARLAVRAAAGTP
DTDLTPLPTNLIPPVALTPGAGRLDAGQAAAVTALVGDRPLVVIEGAAGVGKTTTLAATR
SLLEAQGRRLVVVTPTLKAAKVAAAEVGAAAGSAARLVYEYGWRWNDDGAWARLAVSDTD
PVTGRVYSGPANAAQLRPGDLLVVDEAGMLDQDTARAVLTIADECRLRVALLGDRHQLAA
VGRGGVLDLAVGQVDADAYLTLQGVHRFTRIGPDGRTLPDVGYADLTLAMRVGDDSGKVF
DTLLARGQIRLHPDPDVLREAIAASAVASYADSRQVAVVVDTRDQAAMLNAAIRGRLVVA
GRVDDTWVVSTAAGERIGVGDRVATRRNDRDLDVANRDVWIVTGVGRDGGLRVTPADVTP
AGLVPASASPTATRQRWLPGDYVTAHLELAYATTAHGAQGDSVTAAHLVVGEHTGAASAY
VGMTRGREANTAHLVAADADEAREQWVAVFARDRADLGPAHAAEQAAAEAARYSARPLEQ
VVADLHRAWTVEQNCLDRLAFWQPQRDQLREVVTLEAPHAGELARLEAVRERAAIAAQQA
HQRAQASAAAVATEADRIRDRLLGSWDGERGAARAAAKVVLDGSGRLGLRRGAVARAKEQ
LADWAERWRAHVPSLPSDPKELARLAGWFDDRPALWAALDTSAQRAAEAAHPEHGAQGAA
AVAARQQYEQARSALAEAHRQRDQRLRGLEPAAWTPEPQARLAELDRDIAATRQELTDAR
ARIATLRAEHLAVPGAEPARVQPAERLAQEHDAWRARRRNAERAARRAGDVRTTPNQRPI
HVPPPPLSPGPRPGAGPGMGR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgaagatctacgccggcgcgcctgcggccgcccggcactacgtcgaggtcgaccgcagc
cgggcggatgactactacctggcggagggaaccggggtggcccgccgcttcacggccggc
gacggtcgggtgaccgagcttgccccgctgaccggccaggcgtacgagacctgggtggcc
ggacgcgacccggccaccaacgacgcacgagggcagctgcgccacgacgagcacgccgtc
cgcttcgtcgaggtcatcgtgaacgggccgaagacctggtcgatcgcgtcggcgctgcac
ccggacatcgcccgggcgtacgaggcggcgcaggaccgggccgcggggcagatcatcgcc
tggctgtccgagcacgccaccacccgggtcggcccgcgcggtgggcaggtgccgatgccg
gtggaggtgctggaggcggcgacggtgcggcacttcacctcccgcgccggggacccgcac
tggcatctgcacctccagttcctgtccagagtgttcgccgccgggaaatggcgcggcatg
ttcacagtggatgtgcgcgactccctcgccgcgatcaacgggatcgggcatgcggcgatg
gacaccgacccggaattgaatgccacgttcgccgcgcacgggtacgccaaggacgcgacc
ggagaaatacgggagctctccgactatgtcggtcctttcagcgcccggcatgcgcagatc
gcccggaatgcggatcgctacgaacgggaatggaccaccgcgcacccgggcgaacacccc
ggccccgccctgcgccgctcctgggacacgcgcgcctgggccgagggtcgcccggacaag
gtcaccccgcagtcgggggtgaacgtgaccgaacgctggcgcacggagctgcaccgcctc
ggcttccggcccccgagcaggcccgtgcccctggtccccgccccggtcggcgcgctgaac
cgggacgagctcgtggggcgggcgctgacgcggctcgcggccggccggtcggcctggaac
gcggcggacgtgcgcggggaggtggagcggttgatcgccgccgaaggcatcgtcaccggg
ccggcggtacgcatcgagctggccgaggatctcaccgcccgcgctctgggacgctgcgtg
ccgctgctggaccgcgacggcatacccgagcacatccgggcctggacctcccgcccggtg
ctcgccgtggagaccgacctgaccgcccggctcgccgtccgcgccgcggccggcacacct
gacaccgacctgacacccctgccgaccaacctgatacctccggtcgcgctcacgccgggt
gccgggcggctggacgctggccaagctgccgccgtgaccgcgttggtcggcgaccggccg
ctggtcgtgatcgagggcgcggccggtgtcgggaagaccaccacgctcgccgcgacccgc
agtctgctcgaggcacaggggcggaggctggtggttgtcactccgacgctgaaggccgcg
aaggtcgccgccgcggaggtgggcgcggccgcggggtcggcggcccggctggtctacgag
tacggctggcgctggaacgacgacggcgcctgggcccgcctcgcggtcagcgataccgac
ccggtcaccggccgcgtctacagcggcccggccaacgccgcccagctgcggcccggcgac
cttctcgtcgtggacgaagcgggcatgctcgaccaggacaccgcgcgagccgtcctgacg
atcgccgacgagtgccggcttcgggtggcgctgctcggcgaccggcaccagctggccgca
gtcggccgcggcggcgtcctcgacctcgcggtcggccaggtcgacgccgacgcctacctg
acattgcagggggtgcatcgcttcacccgcatcggcccggacggccgcaccctgccggat
gtcggctacgcggacctgacccttgcgatgcgtgtcggcgacgactccggcaaggtgttc
gacaccctgctggcccgcgggcagatccgattgcaccctgaccccgacgtgctgcgggag
gccatcgccgccagcgccgtggcgtcgtacgccgacagccgccaggtggcggtggtggtc
gacacccgcgaccaggccgccatgctcaacgccgccatccgcggccggctggtcgtcgct
ggccgcgtcgacgacacgtgggtcgtcagcaccgccgcgggggagcggatcggggtcggc
gaccgggtggccacccgccgcaacgaccgcgacctcgatgtcgccaaccgcgacgtctgg
atcgtcactggcgtcggccgggacggcgggttgcgtgtcacccccgccgatgtcacccca
gccggacttgttcctgcatctgccagcccgaccgccacgcggcagcggtggctgccgggc
gactacgtcaccgcgcacttggagctcgcgtacgcgaccaccgcgcacggcgcgcagggt
gacagcgtcaccgctgcccatctggtggtcggggagcacaccggtgccgcgtcggcgtac
gtcggaatgacccgtggacgcgaggcgaacaccgctcacctcgtcgccgccgacgcggac
gaggcgagggagcagtgggtcgccgtcttcgcccgtgaccgcgccgacctcggccccgct
cacgccgccgaacaggccgccgccgaggccgcccgctactccgcacgtccgctggagcag
gtcgtggccgacctgcaccgggcgtggaccgtcgagcagaactgcctggaccggctggcc
ttctggcagccgcagcgtgaccagctacgggaggtggtcacgctcgaagctccccacgcc
ggcgaactcgcgaggctggaggccgtccgggagcgggcggcgatcgccgcccagcaggct
catcagcgggcacaggccagcgcggccgcggtcgccaccgaggccgaccggatccgcgac
agactgctgggctcctgggacggcgaacgcggcgccgcccgcgcggcggcgaaggtcgtg
ctcgacgggtccggccggctcgggctgcgccggggcgcggtcgcccgcgccaaagagcag
ctcgccgactgggccgagcggtggcgcgcccacgttccctccctgcccagcgatccgaag
gagctcgcgcgcctggctggctggttcgacgaccggcccgcgctgtgggctgcgctcgac
acctccgctcaacgcgccgccgaagccgcccaccccgagcacggcgcccagggcgccgcc
gcggtcgccgcccggcagcagtacgagcaggcccggtccgcgctggccgaggcccaccgc
caacgcgaccagcgactccgaggattggaacccgccgcctggacccccgagccccaggcg
cggctcgccgagctggaccgagacatcgccgccacccggcaggagctcaccgacgcccgg
gcgcgcatcgccaccctcagggccgaacacctcgccgtccccggcgccgaaccggcccgg
gtgcagcctgccgagcggctcgcccaggagcacgacgcgtggcgcgcccgccgacggaac
gccgagcgggccgcccgccgagcaggcgacgttcggacaaccccgaaccagcggcccatc
catgtgccaccgccaccactgagccccggaccacggccgggtgccggacctggtatgggg
cggtga
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