Bacillus shivajii: LGQ02_03170
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Entry
LGQ02_03170 CDS
T07881
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bshi
Bacillus shivajii
Pathway
bshi03420
Nucleotide excision repair
bshi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGQ02_03170 (pcrA)
03430 Mismatch repair
LGQ02_03170 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bshi03400
]
LGQ02_03170 (pcrA)
Enzymes [BR:
bshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGQ02_03170 (pcrA)
DNA repair and recombination proteins [BR:
bshi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGQ02_03170 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LGQ02_03170 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
AAA_12
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
UCZ53802
LinkDB
All DBs
Position
648961..651225
Genome browser
AA seq
754 aa
AA seq
DB search
MERMKEQLLEGLNPEQKEAVKHGDGPLLIMAGAGSGKTRVLTHRMAYLIAENGVPHWSIL
AITFTNKAAREMKERVAKIAGGQAEEMWISTFHSMCVRILRRDIDRIGVNRNFTILDGSD
QQTVIKRLMKELNIDVKKFEPRSILGSISSAKNELKTPKDLEKTASGPYEETVHKVYEAY
AKELKKNQALDFDDLIMTTIRLFNQVPEVLEYYQRRFRYIMVDEYQDTNHAQYKLVKMIA
ESHENICVVGDSDQSIYRWRGADIKNILSFEKDYPNATTIMLEQNYRSTKRILQAANVVI
ENNMNRKPKKLWTDNDEGEKISYYEADSEHDEAQFVIGKIKELTEQQQVSPADIAVLYRT
NAQSRVIEEMFVKSNIPYTIVGGTKFYDRKEIKDLLAYLRLVANPDDDISFRRIINVPRR
GIGNTTVDKISAYAATHDLSFYQALQEVDQIGLSARFHKTLREFSDQLRNWVQMQDYLSV
TELVEELLEKTGYREMLKNEKSLEAEARLENINEFLSVTKEFEKSNDDKSLIAFLTDLAL
IADIDKVDDENEEEQEKALLMTLHSAKGLEFPYVFLIGLEEGVFPHSRSLMEEAEMEEER
RLAYVGITRAEEQLYLTRARMRTLYGRTNMNPASRFLSEIPEDLLDSLKEEKSEATPPWM
KTSRSAGSGLGSPQSARPTPSQPSSTRTTQRKATTKTGGDSFEWSVGDKASHKKWGVGTV
VSMKGDGENVELDIAFPQVGIKRLFAKFAPITKV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcatgaaagagcagttgttagaagggttaaaccctgaacaaaaagaagcggta
aagcacggtgacggaccgctactcattatggctggtgcaggaagtgggaaaacgagagta
ttaacgcaccgcatggcgtacttaattgctgaaaatggagtaccgcattggtcaatctta
gcgattacctttacgaataaagcggcacgtgaaatgaaagaacgtgtggcaaaaattgca
ggtggacaagcagaggaaatgtggatttcaactttccactcgatgtgtgtacgtattctt
cgccgagacattgacagaataggggtcaatcgtaactttacgattttagatggatcagac
cagcaaacggttataaaacgactcatgaaagagttaaacattgatgtgaaaaagtttgag
cctcgttcgattttaggttcgattagctcagcaaaaaacgaattaaaaacgccgaaagac
cttgaaaaaacagcttctggaccttacgaagaaaccgtacacaaagtgtatgaagcttat
gcaaaagagttaaagaaaaatcaagcgcttgatttcgatgacttgattatgacgacgatt
agactttttaatcaagtaccagaagttttggaatactatcagcgtaggtttcgttatatc
atggttgatgagtatcaagatacaaaccatgcacaatataagttagtgaagatgattgca
gaaagtcatgaaaatatttgtgtagttggtgactctgaccagtccatctatcgttggcgt
ggtgctgatattaaaaacatcttatcgtttgaaaaagactatccaaatgctacgacaatc
atgctagagcaaaactatcgttcgacgaaacgcattttacaagcggcgaacgtagtgatt
gaaaacaatatgaatcgtaaaccgaaaaaactttggactgataacgatgaaggcgaaaaa
atatcttattatgaagcagatagtgagcatgatgaagcgcagtttgtcatcggaaaaata
aaggagttaactgaacaacaacaagtttctcctgctgatattgccgttttataccgtaca
aacgctcaatcgcgtgtgattgaggaaatgtttgtgaaatcgaacattccttacacgatc
gttggcggaacaaagttctacgacagaaaagaaattaaagatttactagcttacttacgc
ttagtggcaaatccagacgatgatattagcttccgcaggattatcaatgtaccacggcgt
gggataggtaacacaacagtcgataaaattagtgcttacgcggcaactcatgacttatcg
ttttaccaagcattacaagaagtcgatcaaattggtttaagtgctcgtttccataaaacg
ttacgtgaatttagcgatcaactaagaaactgggtacaaatgcaagactatttatcggtc
acagaactagtggaagaactgctagaaaaaacgggataccgcgagatgcttaaaaatgaa
aaatctttagaagctgaagcccgtttagagaacattaacgagtttttatctgttacgaaa
gagtttgagaaaagcaatgatgacaagtctcttatcgcatttttaaccgatttagcatta
attgcggatattgataaagttgatgatgaaaatgaagaagagcaagagaaggctttgctt
atgacattacactcggcgaaaggtcttgagttcccttatgtcttcctcatcggtcttgag
gaaggggtattcccacatagccggtcgttaatggaggaagcagaaatggaagaggagcgt
cgccttgcttacgtagggatcactcgtgccgaagaacagctctacttaacgcgtgcaagg
atgcgtacactctacggtagaacaaatatgaatcctgcgtcacgctttttaagtgaaatt
cctgaggacttattagattcattaaaagaagaaaaaagtgaagcgacaccgccgtggatg
aaaacgtcaaggtcagcaggatcaggattaggttcaccccaaagtgcaagaccaacccct
tcacaaccttcttcgacacgtacaacgcaacgtaaggcgacgacgaaaacaggtggagat
tcttttgaatggagtgttggtgacaaagcttcccataaaaaatggggtgttggaacagtt
gtcagcatgaaaggtgatggggaaaatgtggaattagatattgcatttcctcaagttggg
ataaaacgactatttgcgaagtttgcaccaattacgaaagtgtaa
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