Betta splendens (Siamese fighting fish): 114846351
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Entry
114846351 CDS
T08231
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03022
Basal transcription factors
bspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114846351 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
114846351 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114846351 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114846351 (gtf2h2)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114846351 (gtf2h2)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114846351 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
114846351
NCBI-ProteinID:
XP_028991086
EnsemblRapid:
ENSBSLG00000021415
UniProt:
A0A6P7L8Z7
LinkDB
All DBs
Position
19:681596..685381
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEELLFQSKRKRVIESHGQVRLGMMRH
LFVVIDCSRTMEDQDLKPNRLTSTLKLMEAFVDEYFDQNPISQVGIITTKNKRAEKLTEL
TGNPKKHIAALKKAVDTACVGEPSLYNSLNLAIQTLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLKSLKMRVSIIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTVASFTDQDAKPSFSMSHLDSSSGPGLSLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLPAFVEVPVDEMESDRFCQACQGELKDKSAFSC
TSCHSAFCVECDLFIHDSLHCCPCCIHSQSVP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagccagagcgagccaagcgctgggaagggggctatgagaggacctgggag
gtcctaaaggaggatgaatctggctcactcaaagccaccgtagaggagctcctgttccag
tccaaaagaaaaagggtcatagagagccatggacaagtgagacttggaatgatgcgacac
ctctttgtggtgattgactgctcaagaaccatggaggaccaggacctgaagccaaaccgc
ctcacctctactttaaaactgatggaagcttttgtggatgagtattttgaccaaaacccc
atcagtcaggtgggcattatcaccaccaagaacaaaagggcggagaagctgactgagctg
acaggaaatcctaaaaaacacattgctgctctgaagaaagcggtggacactgcatgtgtg
ggggagccgtccctgtacaattctctaaacctggccatacagacactcaagcacatgcct
ggacatacaagccgcgagattctgataatcctgagtagcctcaccacctgtgacccagcc
aacatctatgagttgattaagaccctcaagtcgctgaagatgcgggtgtcgataattggc
ctttcagcagaggtgcgggtgtgcacagtgttgaccagagagacaggcggctcgtaccac
gttatcctggatgagagccacttcaaagagctgctgatgttacacgtcaagcctccccca
gccagctcgtcctctgaatgctccttaatacgcatgggtttccctcagcacaccgttgct
tctttcactgatcaggatgctaaaccttcgttcagcatgtctcatttggacagcagcagt
ggcccaggtctgtctctaggaggatacttctgtccacagtgccacgccaaatatacagag
ctaccagtggagtgtaaagtctgtggtttgactctggtgtcggccccacatcttgccaga
tcctttcaccacctcttccctctcccagccttcgtagaggttcctgtggatgaaatggaa
agtgacaggttctgtcaagcttgtcaaggggagctgaaggacaaaagtgcgttcagctgt
acgtcctgccacagtgccttctgtgtggaatgtgatctcttcatccatgattctctccac
tgctgcccgtgttgcattcacagtcagagtgtcccctga
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